DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and glr-8

DIOPT Version :10

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:422 Identity:92/422 - (21%)
Similarity:162/422 - (38%) Gaps:52/422 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 MDSISRIGNRLIMHTQEILGFKLHYIW----CGTWSVQDAFGGAIGMLTNESAELCTTPFVPSWN 288
            |:.:..||.||.: |.|||. .|...|    .|:|:      ||.|.|.....:|.....:..::
 Worm    97 MEILKEIGKRLNL-TYEILP-ALGSTWGEYLNGSWT------GAFGQLVRGEVDLLAGGAIMEYD 153

  Fly   289 RLHYLHPMTEQAQFRAV-CMFRTPHN-AGIKAAVFLEPFMPSVWFAFAGLLIFAGVLLWMIFHLE 351
            | ..:..:|...||... .|.|:|.. ......:..|||...||...|.:::.:||:..::.::.
 Worm   154 R-SVIADLTYPFQFEPTGIMIRSPEKYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLVMTNII 217

  Fly   352 RHWMQRCLDFIPSLLSSCLISFGAACIQGSYLMPKSAGGRLAFIAVMLTSFLMYNYYTSIVVSTL 416
            |...:   :...:...|..:.|.....||....|:|...|:......|.|..:...:|..:|:..
 Worm   218 RKVYE---EMTVTPFESIWVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALF 279

  Fly   417 LGSPVRSNIRTIQQLA----DSSLDVGFDTVPFTKTYLVS-SPRPDIRSLYKQKVESKRDP--NS 474
            .........:.|.||.    ....::..|...||:|.::: |..|..|.|:.:.:.:.:..  |.
 Worm   280 AVDKTNVPFQNIDQLVRLVKQGKFEIVMDENSFTRTEMIARSKLPVYRDLWHEMIVNHKVKYVNG 344

  Fly   475 VWLSPEEGVIRVRDQPGFVYTSEASFMYHFVEKHYLPREISDLNEIILRPESAVYGMVHL--NST 537
            :    ..||..||..||:......:.:..:.   |...::...|:.||    .||..:.|  ||.
 Worm   345 I----ARGVAFVRANPGYALLGPMATLNFYA---YSDCKVILFNDGIL----PVYLSIPLVKNSI 398

  Fly   538 YRQLLTQLQVRMLETGITSK----QSRFFSKTKLHTFSNSFVI----QVGMEYAAPLFISLLVAY 594
            |....:.....|:|.|.|.|    ...:.:..|::. .||..|    .:.::.|...|...|...
 Worm   399 YSPYFSTKIREMVERGFTQKWIADYRSYVAMQKINE-CNSTTIGPKSYLDLKRAQGAFWVFLGGA 462

  Fly   595 FLALLILILEICWARYAKK-----KFSTIIPQ 621
            .|.|.:.:.|..:..:.:|     |.:|:.|:
 Worm   463 GLGLALFVGEFIFKFFREKMTKHTKTTTVPPE 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..>508 CDD:459656 35/186 (19%)
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 78/349 (22%)

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