DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and glr-8

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:422 Identity:92/422 - (21%)
Similarity:162/422 - (38%) Gaps:52/422 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 MDSISRIGNRLIMHTQEILGFKLHYIW----CGTWSVQDAFGGAIGMLTNESAELCTTPFVPSWN 288
            |:.:..||.||.: |.|||. .|...|    .|:|:      ||.|.|.....:|.....:..::
 Worm    97 MEILKEIGKRLNL-TYEILP-ALGSTWGEYLNGSWT------GAFGQLVRGEVDLLAGGAIMEYD 153

  Fly   289 RLHYLHPMTEQAQFRAV-CMFRTPHN-AGIKAAVFLEPFMPSVWFAFAGLLIFAGVLLWMIFHLE 351
            | ..:..:|...||... .|.|:|.. ......:..|||...||...|.:::.:||:..::.::.
 Worm   154 R-SVIADLTYPFQFEPTGIMIRSPEKYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLVMTNII 217

  Fly   352 RHWMQRCLDFIPSLLSSCLISFGAACIQGSYLMPKSAGGRLAFIAVMLTSFLMYNYYTSIVVSTL 416
            |...:   :...:...|..:.|.....||....|:|...|:......|.|..:...:|..:|:..
 Worm   218 RKVYE---EMTVTPFESIWVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALF 279

  Fly   417 LGSPVRSNIRTIQQLA----DSSLDVGFDTVPFTKTYLVS-SPRPDIRSLYKQKVESKRDP--NS 474
            .........:.|.||.    ....::..|...||:|.::: |..|..|.|:.:.:.:.:..  |.
 Worm   280 AVDKTNVPFQNIDQLVRLVKQGKFEIVMDENSFTRTEMIARSKLPVYRDLWHEMIVNHKVKYVNG 344

  Fly   475 VWLSPEEGVIRVRDQPGFVYTSEASFMYHFVEKHYLPREISDLNEIILRPESAVYGMVHL--NST 537
            :    ..||..||..||:......:.:..:.   |...::...|:.||    .||..:.|  ||.
 Worm   345 I----ARGVAFVRANPGYALLGPMATLNFYA---YSDCKVILFNDGIL----PVYLSIPLVKNSI 398

  Fly   538 YRQLLTQLQVRMLETGITSK----QSRFFSKTKLHTFSNSFVI----QVGMEYAAPLFISLLVAY 594
            |....:.....|:|.|.|.|    ...:.:..|::. .||..|    .:.::.|...|...|...
 Worm   399 YSPYFSTKIREMVERGFTQKWIADYRSYVAMQKINE-CNSTTIGPKSYLDLKRAQGAFWVFLGGA 462

  Fly   595 FLALLILILEICWARYAKK-----KFSTIIPQ 621
            .|.|.:.:.|..:..:.:|     |.:|:.|:
 Worm   463 GLGLALFVGEFIFKFFREKMTKHTKTTTVPPE 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 47/233 (20%)
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 78/349 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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