DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and Grik2

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_011241422.1 Gene:Grik2 / 14806 MGIID:95815 Length:943 Species:Mus musculus


Alignment Length:765 Identity:146/765 - (19%)
Similarity:254/765 - (33%) Gaps:261/765 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KEAFPLVEMLNQNGIFSQYIDVQNPDNLANVHKEYLDSDLVRLGVFLDLGCDKAELVTNQSSRAR 95
            |:|.||::.:.:.                   ||:        .|..|...:.|..:..|:....
Mouse   209 KDAKPLLKEMKRG-------------------KEF--------HVIFDCSHEMAAGILKQALAMG 246

  Fly    96 LYNQNLHWLLYDEAGNFTKLTQL--------FEGANLS----LNADVTYVSREDE----ERF--- 141
            :..:..|::       ||.|...        :.|.|::    ||.:.|.||...|    ||.   
Mouse   247 MMTEYYHYI-------FTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAP 304

  Fly   142 -----------------ILHDVYNKGSHLGGKLNITVDQ-------TLQCNRSH-----CQVKEY 177
                             :::|..    |:   :::.|.|       :|||||..     .:....
Mouse   305 PKPDSGLLDGFMTTDAALMYDAV----HV---VSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSL 362

  Fly   178 LSELH---LRPR--------LQHRMDLSSVTFRLAALVSV-----------------LPINSS-- 212
            :.|.|   |..|        |:...||..::.:...|..:                 .|.|.:  
Mouse   363 IKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTESQKGKPANITDS 427

  Fly   213 ------------EEELLEFLNSDRDSHMDSISRIGN--------RLIMHTQEILGF--KLHYIWC 255
                        ||..:.|..||:..:       ||        .|:.....||||  ::..:..
Mouse   428 LSNRSLIVTTILEEPYVLFKKSDKPLY-------GNDRFEGYCIDLLRELSTILGFTYEIRLVED 485

  Fly   256 GTWSVQD----AFGGAIGMLTNESAELCTTPFVPSWNR---LHYLHP-MTEQAQFRAVCMFRTPH 312
            |.:..||    .:.|.:..|.:..|:|...|...::.|   :.:..| ||    .....::|.|:
Mouse   486 GKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMT----LGISILYRKPN 546

  Fly   313 NAGIKAAVFLEPFMPSVWFAFAGLLIFAGV--LLWMIFHLER------------HWMQRCL--DF 361
            ........||.|..|.:|...  ||.:.||  :|::|....:            |..||||  ..
Mouse   547 GTNPGVFSFLNPLSPDIWMYI--LLAYLGVSCVLFVIARQSKFSWFKYPNCSHYHHSQRCLCTQH 609

  Fly   362 IPSLLSSCLIS----------------------------FGAACI--QGSYLMPKSAGGRLA--- 393
            :.|.:..||.|                            ||...:  |||.||||:...|:.   
Mouse   610 LESYMELCLFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGI 674

  Fly   394 ---FIAVMLTSFLMYNYYTSIVVSTLLGSPVRSNIRTIQQLA-DSSLDVGFDTVPFTKTYLVSSP 454
               |..::::|      ||:.:.:.|....:.|.|.:...|| .:.::.|......|.|:...|.
Mouse   675 WWFFTLIIISS------YTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSK 733

  Fly   455 RPDIRSLYKQKVESKRDPNSVWLSPEEGVIRVRDQPGFVYTSEASFMYHFVEKHYLPREISDLNE 519
            ......::  ...|.|..:.:..|.|||:.|       |.||:.:|:.......::.:...:|.:
Mouse   734 ISTYDKMW--AFMSSRRQSVLVKSNEEGIQR-------VLTSDYAFLMESTTIEFVTQRNCNLTQ 789

  Fly   520 IILRPESAVYGM-VHLNSTYRQLLTQLQVRMLETGITSKQSRFFSKTKLHTFSNSF--------- 574
            |....:|..||: ..:.|.||..:|...:::.|.|            |||.....:         
Mouse   790 IGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEG------------KLHMMKEKWWRGNGCPEE 842

  Fly   575 ----VIQVGMEYAAPLFISLLVAYFLALLILILEICW-----ARYAKKKF 615
                ...:|::....:||.|.....|::.:.:.|..:     |:..|:.|
Mouse   843 ESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEKRSF 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 60/278 (22%)
Grik2XP_011241422.1 PBP1_iGluR_Kainate 37..414 CDD:380605 41/245 (17%)
Periplasmic_Binding_Protein_Type_2 430..835 CDD:389745 94/444 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846363
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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