DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75c and GRIN3B

DIOPT Version :9

Sequence 1:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_619635.1 Gene:GRIN3B / 116444 HGNCID:16768 Length:1043 Species:Homo sapiens


Alignment Length:408 Identity:80/408 - (19%)
Similarity:138/408 - (33%) Gaps:120/408 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 RSHCQVKEYLSELHLRPRLQHRMDLSSVT---------FRLAALVSVLPINSSEEELLEFLNSDR 224
            |:...|..|.|.|:|...:..|..:||.|         ..|.|:..:|.::|....|...:..|:
Human   608 RNRSTVFSYSSALNLCYAILFRRTVSSKTPKCPTGRLLMNLWAIFCLLVLSSYTANLAAVMVGDK 672

  Fly   225 DSHMDSISRIGNRLIMHTQEILGFKLHYIWCGTWS--VQDAFGG---------------AIGMLT 272
            .  .:.:|.|.:..:.|..:  ||:...:|..:..  ::.:|..               .:.|||
Human   673 T--FEELSGIHDPKLHHPAQ--GFRFGTVWESSAEAYIKKSFPDMHAHMRRHSAPTTPRGVAMLT 733

  Fly   273 NESAELCTTPFVPSWNRLHYLHPMTEQAQFRAVCMFRT--------------PHNAGI------- 316
            ::..:|  ..|:...:.|.|      :....|.|...|              |.|:.:       
Human   734 SDPPKL--NAFIMDKSLLDY------EVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNLSEF 790

  Fly   317 ----KAAVFLEPFMPSVWFAF--AGLLIFA--GVLLWMIFHLERHWMQRCLDFIPSLLSSCLISF 373
                |::.|:: .:...|:..  .|..:||  ..|...|:|....::..||....:||||     
Human   791 ISRYKSSGFID-LLHDKWYKMVPCGKRVFAVTETLQMSIYHFAGLFVLLCLGLGSALLSS----- 849

  Fly   374 GAACIQGSYLMPKSAGGRLAFIAVMLTSFLMYNYYTSIVVSTLLGS--PVRSNIRTIQQLADSSL 436
                      :.:.|..|||...:...|.|.|..:||..:...|.:  |..|...|.:  |:.| 
Human   850 ----------LGEHAFFRLALPRIRKGSRLQYWLHTSQKIHRALNTEPPEGSKEETAE--AEPS- 901

  Fly   437 DVGFDTVPFTKTYLVSSPRPDIRSLYKQKVES------KRDPNSVWLSPEEGVIRVRDQPGFVYT 495
                              .|::....:|:.:.      ||...:|   .:|..:|...:|..|..
Human   902 ------------------GPEVEQQQQQQDQPTAPEGWKRARRAV---DKERRVRFLLEPAVVVA 945

  Fly   496 SEASFMYHFVEKHYLPRE 513
            .||.     .|....|||
Human   946 PEAD-----AEAEAAPRE 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 43/198 (22%)
GRIN3BNP_619635.1 PBP1_iGluR_NMDA_NR3 19..405 CDD:107372
PBP2_iGluR_NMDA_Nr3 415..808 CDD:270438 37/212 (17%)
Lig_chan 576..842 CDD:278489 46/246 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155921
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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