Sequence 1: | NP_649013.3 | Gene: | Ir75c / 39983 | FlyBaseID: | FBgn0261401 | Length: | 623 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017952374.2 | Gene: | grin3b / 100497172 | XenbaseID: | XB-GENE-990106 | Length: | 1005 | Species: | Xenopus tropicalis |
Alignment Length: | 412 | Identity: | 84/412 - (20%) |
---|---|---|---|
Similarity: | 146/412 - (35%) | Gaps: | 109/412 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 248 FKLHYIWCGTWSVQ--DAFGGAIGMLTNESAELCTTPFVPSWNR---LHYLHPMTEQAQFRAVCM 307
Fly 308 FRTPHNAGIKAAVFLEPFMPSVWFA-FAGLLIFAGVLLWMIFH-------LERHWMQRCLDF-IP 363
Fly 364 SLLSSC-LISFGAACIQGSYLMPKSAGGRLAFIAVMLTSFLMYNYYTSIVVSTLLGSPVRSNIRT 427
Fly 428 IQQLADSSLDVGFDTVPFTKTYLVSSPRPDIRSLYKQKVESKRDPNSVWLSPEEGVIRVRDQPGF 492
Fly 493 VYTSEASF--MYHFVEK----------HYLPREISDLNEIILRPESAVYGMVHLNSTYRQLLTQL 545
Fly 546 QVRMLE---------TGITSKQSRFFSKTKLHTFSNSF-------------------VIQVGMEY 582
Fly 583 AAPLFISLLVAYFLALLILILE 604 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir75c | NP_649013.3 | Lig_chan | 328..553 | CDD:306551 | 51/255 (20%) |
grin3b | XP_017952374.2 | PBP1_iGluR_NMDA_NR3 | 29..402 | CDD:380600 | |
PBP2_iGluR_NMDA_Nr3 | 418..814 | CDD:270438 | 76/366 (21%) | ||
Lig_chan | 582..848 | CDD:395014 | 63/315 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |