DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75a and GLR1.1

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_187061.1 Gene:GLR1.1 / 819566 AraportID:AT3G04110 Length:808 Species:Arabidopsis thaliana


Alignment Length:645 Identity:107/645 - (16%)
Similarity:204/645 - (31%) Gaps:220/645 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 KCDQTQDLLEEASREQIYNQHYHWLLVG-NQSKLEFY----DLFGLFN----ISIDADV----SY 135
            :|.:...|:|||         :.|:|.. ..:.||.:    .:.|:..    |.:..:|    |.
plant   237 QCVEKLGLMEEA---------FAWILTARTMNYLEHFAITRSMQGVIGFKSYIPVSEEVKNFTSR 292

  Fly   136 VKEQIQDNNDS-----------------VAYAVHDVYNNGKI-----IGGQL----------NVT 168
            :::::.|:.::                 :|.||.....:||:     :...|          .::
plant   293 LRKRMGDDTETEHSSVIIGLRAHDIACILANAVEKFSVSGKVEASSNVSADLLDTIRHSRFKGLS 357

  Fly   169 GSHEMSCDPFVC---------RRTRHLSSLQKRSKYGNREQLT-------------------DVV 205
            |..::|.:.|:.         |..:....|.....:..|.|:.                   ..|
plant   358 GDIQISDNKFISETFEIVNIGREKQRRIGLWSGGSFSQRRQIVWPGRSRKIPRHRVLAEKGEKKV 422

  Fly   206 LRVAT--------VVTQRPLTLSDDELIRFLSQENDTHIDS------------LARFGFHLTLIL 250
            |||..        :|:.||              :.:|.:::            :|.|.:.|..|.
plant   423 LRVLVTAGNKVPHLVSVRP--------------DPETGVNTVSGFCVEVFKTCIAPFNYELEFIP 473

  Fly   251 RDLLHCKMKFIFSDSWSKSDVVGGSVGAVVDQTADLTATPSLATEGRLKYLSAIIETGFFRSVCI 315
            ....:..:.::.|....|.|...|.:        .:|:..||..:..|.|..  |..|..     
plant   474 YRGNNDNLAYLLSTQRDKYDAAVGDI--------TITSNRSLYVDFTLPYTD--IGIGIL----- 523

  Fly   316 FRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIGVLLWITFYMECKRMQKRWRLDYLPSLLSTFL 380
              |..........|..||...:|...|....|.|:::|:.........|..|     ...||..|
plant   524 --TVKKKSQGMWTFFDPFEKSLWLASGAFFVLTGIVVWLVERSVNPEFQGSW-----GQQLSMML 581

  Fly   381 -ISFGAACIQSSSLIPRSAGGRLIYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQL--- 441
             ..|..........:.:.:...|:...:|::..:     ||...::|.|:...|:::...|:   
plant   582 WFGFSTIVFAHREKLQKMSSRFLVIVWVFVVLIL-----TSSYSANLTSTKTISRMQLNHQMVFG 641

  Fly   442 -AESSLTVGLEPLPFTKSY--------LNY--SRLPEIHLFIKRKIESQTQNPELWLPAEQGVLR 495
             :.:|:|..|..:...::|        ||:  :.:|.:.:.|       ...|..::..:    |
plant   642 GSTTSMTAKLGSINAVEAYAQLLRDGTLNHVINEIPYLSILI-------GNYPNDFVMTD----R 695

  Fly   496 VRDNPGYVYVFETSSGYAYVERYFTAQEICDLNEVLFRPEQLFYTHLHRNSTYKELFRLR---FL 557
            |.:..|:.::|:..|               ||...:.|                |:.:||   .|
plant   696 VTNTNGFGFMFQKGS---------------DLVPKVSR----------------EIAKLRSLGML 729

  Fly   558 RILETGVYRKQRSYWVHMKLHCVA-----------------QNFVITVGMEYVAPLLLML 600
            :.:|...::|..|..||.....||                 :...|..|..:|..|.|.|
plant   730 KDMEKKWFQKLDSLNVHSNTEEVASTNDDDEASKRFTFRELRGLFIIAGAAHVLVLALHL 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 53/299 (18%)
GLR1.1NP_187061.1 PBP1_GABAb_receptor 31..397 CDD:107361 25/168 (15%)
ANF_receptor 45..377 CDD:279440 23/148 (16%)
Periplasmic_Binding_Protein_Type_2 421..737 CDD:304360 68/398 (17%)
Lig_chan 542..781 CDD:278489 49/290 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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