DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and GLR3.5

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001324013.1 Gene:GLR3.5 / 817800 AraportID:AT2G32390 Length:953 Species:Arabidopsis thaliana


Alignment Length:732 Identity:140/732 - (19%)
Similarity:246/732 - (33%) Gaps:213/732 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NLVQSRIGFIV---------LF------------HCWQSDESLKFAQQFMKPIHP--------IL 48
            ||::||| |:|         :|            :.|.:.:.|..|...|:|:.|        ::
plant   234 NLMESRI-FVVHVNPDSGLNIFSVAKSLGMMGSGYVWITTDWLLTALDSMEPLDPRALDLLQGVV 297

  Fly    49 VYHQFV-------QMRGVLNWSHLEL-----SYMGHTQPTLAIY---------VDIKCDQ----- 87
            .:..:.       |.:|  .|.:|..     |..|.....|..|         :|:...|     
plant   298 AFRHYTPESDNKRQFKG--RWKNLRFKESLKSDDGFNSYALYAYDSVWLVARALDVFFSQGNTVT 360

  Fly    88 ---------TQDLLEEASREQIYNQHYHWLLV-------GNQSKLEFYDLFGLFNISIDADVSYV 136
                     |.|...:.|:..|:|:...:|.|       |...::||                  
plant   361 FSNDPSLRNTNDSGIKLSKLHIFNEGERFLQVILEMNYTGLTGQIEF------------------ 407

  Fly   137 KEQIQDNNDSVAYAVHDVYNNGKI-IGGQLNVTGSHEMSCDPFVCRRTRHLSSLQKRSKYGNREQ 200
              ..:.|..:.||.:.::.:.|.: :|...|.||        |.......|.|  |.|....::|
plant   408 --NSEKNRINPAYDILNIKSTGPLRVGYWSNHTG--------FSVAPPETLYS--KPSNTSAKDQ 460

  Fly   201 LTDVVLRVATVV----------TQRPLTLSDDELIRFLSQENDTHIDS--LARFGFHLTLILRDL 253
            ..:.::....|:          ..:||.:.....:   |.:|....|.  |...||.:     |:
plant   461 RLNEIIWPGEVIKPPRGWVFPENGKPLKIGVPNRV---SYKNYASKDKNPLGVKGFCI-----DI 517

  Fly   254 LHCKMK---------FIFSDSWSKSDVVGGSVGAVVDQTADLTATPSLATEGRLKYL---SAIIE 306
            ....::         :|......|:......:..|.....|:..........|.|::   ...||
plant   518 FEAAIQLLPYPVPRTYILYGDGKKNPSYDNLISEVAANIFDVAVGDVTIITNRTKFVDFTQPFIE 582

  Fly   307 TGFFRSVCIFRTPHNAGLRGD-----VFLQPFSPLVWYLFGGVLSLIGVLLWITFYMECKRMQKR 366
            :|.   |.:      |.::|.     .||:||:..:|.:.|.:...:|.::||..:    |..:.
plant   583 SGL---VVV------APVKGAKSSPWSFLKPFTIEMWAVTGALFLFVGAVIWILEH----RFNEE 634

  Fly   367 WRLDYLPSLLSTFLISFGAACIQS-----SSLIPRSAGGRLIYFALFLISFIMYNYYTSVVVSSL 426
            :|......:::.|..||.......     |:|      ||.:......:..|:.:.||:.:.|.|
plant   635 FRGPPRRQIITVFWFSFSTMFFSHRENTVSTL------GRFVLLVWLFVVLIINSSYTASLTSIL 693

  Fly   427 LSSPVKSKIKTMRQLAESSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKIESQTQNPELWLPAEQ 491
            ....:.|:|:.|..|..|:..:|::...|...:|    :.|:::...|.|  ..::.|.:|.|.|
plant   694 TVQQLTSRIEGMDTLIASNEPIGVQDGTFAWKFL----VNELNIAPSRII--PLKDEEEYLSALQ 752

  Fly   492 ------GVLRVRDNPGYVYVFETSSGYAYVERYFTAQEICDLNEVLFRPEQLFYTH------LHR 544
                  ||..:.|...|:....::|.             |.     ||.....:|.      ..|
plant   753 RGPRGGGVAAIVDELPYIKALLSNSN-------------CK-----FRTVGQEFTRTGWGFAFQR 799

  Fly   545 NSTYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQ-----NFVITVGMEYVAPLLLMLICAD 604
            :|..........|::.|.|...|.|..|:.....|..|     |:.|:|...:.    |.|||. 
plant   800 DSPLAVDMSTAILQLAEEGKLEKIRKKWLTYDHECTMQISDTENYQISVQSFWG----LFLICG- 859

  Fly   605 ILVVVILLVELAWKRFF 621
             :|..|.|....||.|:
plant   860 -VVWFIALTLFCWKVFW 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 59/287 (21%)
GLR3.5NP_001324013.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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