DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75a and GLR2.7

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_180476.3 Gene:GLR2.7 / 817460 AraportID:AT2G29120 Length:952 Species:Arabidopsis thaliana


Alignment Length:591 Identity:103/591 - (17%)
Similarity:197/591 - (33%) Gaps:157/591 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QFMKPIHPILVYHQFVQMRGVLNWSHLELSYMGHTQPTLAI---------------YVDIKCDQT 88
            |.:|.::.::.....|              ::.|..|||..               ||.:..|..
plant   216 QILKELYKLMTMQTRV--------------FVVHMPPTLGFRFFQKAREIGMMEEGYVWLLTDGV 266

  Fly    89 QDLLEEASR--------------------EQIYNQHYHWLLV----GNQSKLEFYDLFGLFNI-- 127
            .:||:...|                    :::.|....|..:    ||..::..:.|....:|  
plant   267 MNLLKSNERGSSLENMQGVLGVRSHIPKSKKLKNFRLRWEKMFPKKGNDEEMNIFALRAYDSITA 331

  Fly   128 -SIDADVSYVKEQIQD------NN-------------DSVAYAVHDVYNNG-----KIIGGQL-- 165
             ::..:.:.:|....|      ||             .|:..|:.:|..||     ::|.|||  
plant   332 LAMAVEKTNIKSLRYDHPIASGNNKTNLGTLGVSRYGPSLLKALSNVRFNGLAGEFELINGQLES 396

  Fly   166 ------NVTGSHE------MSCDPFVCRRTRHLSSL-------------QKRSKYGNREQLTDVV 205
                  |:.||.|      ...:..|..::::.:|:             .|....|.:......:
plant   397 SVFDVINIIGSEERIIGLWRPSNGIVNAKSKNTTSVLGERLGPVIWPGKSKDVPKGWQIPTNGKM 461

  Fly   206 LRVATVVTQRPLTLSDDELIRFLSQENDTHIDSLARFGFHLTL---ILRDLLHCKM-KFIFSDSW 266
            |||...|.:        ..:.|:..:.|...:::...|:.:.:   :|:.|.:..: |:|...|.
plant   462 LRVGIPVKK--------GFLEFVDAKIDPISNAMTPTGYCIEIFEAVLKKLPYSVIPKYIAFLSP 518

  Fly   267 SKS------DVVGGSVGAVVDQTADLTATPSLATEGRLKYLSAIIETGFFRSVCIFRTPHNAGLR 325
            .::      .|..|:..|||.... :.|..||..:..|.|    .|:|....|     |......
plant   519 DENYDEMVYQVYTGAYDAVVGDVT-IVANRSLYVDFTLPY----TESGVSMMV-----PLKDNKN 573

  Fly   326 GDVFLQPFSPLVWYLFGGVLSLIGVLLWITFYMECKRMQKRWRLDYL----PSLLSTFLISFGAA 386
            ..|||:|:|..:|.........||.::||        ::.|...|:.    ..:.::|..:|...
plant   574 TWVFLRPWSLDLWVTTACFFVFIGFIVWI--------LEHRVNTDFRGPPHHQIGTSFWFAFSTM 630

  Fly   387 CIQSSSLIPRSAGGRLIYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAESSLTVGLE 451
            .......:..:. .|.:......:..::...||:.:.|......::..:...:.|.:.:..:|.:
plant   631 NFAHREKVVSNL-ARFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTNWKDLIKFNKNIGYQ 694

  Fly   452 PLPFTKSYLNYSRLPEIHLFIKRKIESQTQNPELWLPAEQGVLRVR-DNPGYVYVF--ETSSGYA 513
            ...|.:..|......|..|   :...|..:..||:   ..|.:... |...|:.|.  :.||.|.
plant   695 RGTFVRELLKSQGFDESQL---KPFGSAVECDELF---SNGTITASFDEVAYIKVILSQNSSKYT 753

  Fly   514 YVERYF 519
            .||..|
plant   754 MVEPSF 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 32/190 (17%)
GLR2.7NP_180476.3 PBP1_GABAb_receptor 40..421 CDD:107361 36/218 (17%)
ANF_receptor 54..405 CDD:279440 33/202 (16%)
GluR_Plant 460..799 CDD:270404 63/333 (19%)
Lig_chan 584..832 CDD:278489 32/191 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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