DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and GLR2.3

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001325281.1 Gene:GLR2.3 / 817007 AraportID:AT2G24710 Length:919 Species:Arabidopsis thaliana


Alignment Length:554 Identity:99/554 - (17%)
Similarity:183/554 - (33%) Gaps:153/554 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 MKPIHPILVYHQFVQMRGVLNWSHLELSYMGHTQPTLAIYVDIKCDQTQDLLEEASREQIYNQHY 105
            ::.|:..:.|...:.:....:...:||..| ...||....|.:..|.......:|....:....|
plant   211 LQDINVRIPYRSVIAINATDHEISVELLKM-MNMPTRVFLVHMYYDLASRFFIKAKELGLMEPGY 274

  Fly   106 HWLLVG---------NQSKLE------------------------FYDLFGLFNISIDADVSYVK 137
            .|:|..         |::.:|                        :..||....:|:....:|  
plant   275 VWILTNGVIDDLSLINETAVEAMEGVLGIKTYIPKSPDLEKFRSRWRSLFPRVELSVYGLWAY-- 337

  Fly   138 EQIQDNNDSVAYAVHDVYNN----GKIIGGQLNVTGSHEMSCDPFVCRRTRHLSSLQKRSKYGN- 197
                |...::|.|:.:...|    .|::....||:....:....|..:..:.|.::|.|...|. 
plant   338 ----DATTALAVAIEEAGTNNMTFSKVVDTGRNVSELEALGLSQFGPKLLQTLLTVQFRGLAGEF 398

  Fly   198 ---REQLTDVVLRVATVVTQRPLTL----SDDELIRFLSQENDTHIDSLARFGFHLTLILRDLLH 255
               |.||...|..:..::.....::    ..:.|::.|.|:..: |.:|:.:..||..|:     
plant   399 RFFRGQLQPSVFEIVNIINTGEKSIGFWKEGNGLVKKLDQQASS-ISALSTWKDHLKHIV----- 457

  Fly   256 CKMKFIFSDSW-SKSDVV---------GGSVGAVVDQTADLTATPSLATEGRLKYLSAIIETGF- 309
                      | .::|.|         |..:...|.:....|   .|....|....::.:.||| 
plant   458 ----------WPGEADSVPKGWQIPTKGKKLRIGVPKRTGYT---DLVKVTRDPITNSTVVTGFC 509

  Fly   310 --FRSVCIFRTPHN---------------AGLRGDVFLQPF-----------------SPLVWYL 340
              |....|...|::               ||...|:..|.:                 |..|.:.
plant   510 IDFFEAVIRELPYDVSYEFIPFEKPDGKTAGNYNDLVYQVYLGRYDAVVGDTTILVNRSSYVDFT 574

  Fly   341 FGGVLSLIGVLLWIT------FYMECKRMQKRWRLDYLPSLLSTFLIS--------------FGA 385
            |..:.|.:|:::.:|      :.:..|.:.  |:| :|.|.:|.||:.              .|.
plant   575 FPFIKSGVGLIVEMTDPVKRDYILFMKPLS--WKL-WLTSFISFFLVGCTVWVLEYKRNPDFSGP 636

  Fly   386 ACIQSSSL----------IPR----SAGGRLIYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIK 436
            ...|:|::          .||    |...|.:..|.:.:..::...||:.:.|.|.|..:...|.
plant   637 PRFQASTICWFAFSTMVFAPRERVFSFWARALVIAWYFLVLVLTQSYTASLASLLTSQKLNPTIT 701

  Fly   437 TMRQLAESSLTVGLEPLPFTKSYLNYSRLPEIHL 470
            :|..|.|...|||.:...|....|.....|:..|
plant   702 SMSSLLEKGETVGYQRTSFILGKLKERGFPQSSL 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 37/168 (22%)
GLR2.3NP_001325281.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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