DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and grik1a

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_009303592.1 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:483 Identity:98/483 - (20%)
Similarity:189/483 - (39%) Gaps:119/483 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 NREQLTDVVLRVATVVTQRPLTLSDDELIRFLSQENDTHIDSLARFGFHLTLILRDLLHC----- 256
            :.:.:||.:.....:||    |:.::..:.:  :::|..:....||..:...:|::|.:.     
Zfish   436 DNKNITDSLANRTLIVT----TILENPYVMY--KKSDKVLYGNDRFEGYCLDLLKELSNILGFTY 494

  Fly   257 KMKFIFSDSWSKSDVVG---GSVGAVVDQTADLTATPSLATEGRLK---YLSAIIETGFFRSVCI 315
            ::|.:....:...:..|   |.|..::|..|||...|...|..|.|   :....:..|.  |: :
Zfish   495 EVKLVTDGKYGAQNDKGEWNGMVRELIDHIADLAVAPLTITYVREKVIDFSKPFMTLGI--SI-L 556

  Fly   316 FRTPH--NAGLRGDVFLQPFSPLVW-YLFGGVLSLIGVLLWITFYMECKRMQKRWRLDYLP---- 373
            :|.|:  |.|:..  ||.|.:|.:| |:....|.:..||..|..:...:     |   |.|    
Zfish   557 YRKPNGTNPGVFS--FLNPLTPDIWMYVLLACLGVSCVLFVIARFTPYE-----W---YNPHPCN 611

  Fly   374 ----------SLLSTFLISFGAACIQSSSLIPRSAGGRLI-----YFALFLISFIMYNYYTSVVV 423
                      :||::......|...|.|.|:|::...|::     :|.|.:||     .||:.:.
Zfish   612 PSSEVVENNFTLLNSLWFGVAALMRQGSELMPKALSTRILGGIWWFFTLIIIS-----SYTANLA 671

  Fly   424 SSLLSSPVKSKIKTMRQLAESSLTVGLEPLPFTKSYLNYSRLPE---IHLFIKRKIE-------- 477
            :.|....:.|.|.:...||:             ::.:.|..:.:   :..|.|.||.        
Zfish   672 AFLTVERMDSPIDSADDLAK-------------QTRIEYGAVRDGSTMTFFKKSKISTYEKMWAF 723

  Fly   478 -SQTQNPELWLPAEQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQEICDLNEVLFRPEQLFY-- 539
             |..:|..|...::.|:.||. ...|..:.|::|    :| |.| |..|:|.:|....:...|  
Zfish   724 MSSRKNTALVKNSKDGITRVL-TTDYALLMESTS----IE-YIT-QRNCNLTQVGGLIDSKGYGV 781

  Fly   540 -THLHRNSTYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQNF-------------VITVGM 590
             |.:  .|.|::...:..|::.|.|            |||.:.:.:             ...:|:
Zfish   782 GTPI--GSPYRDKVTIAILQLQEEG------------KLHMMKEKWWRGNGCPEEDSKEASALGV 832

  Fly   591 EYVAPLLLMLICADILVVVILLVELAWK 618
            |.:..:.::|....:|.|.:.:.|..:|
Zfish   833 ENIGGIFIVLAAGLVLSVFVAIGEFIYK 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 62/313 (20%)
grik1aXP_009303592.1 Periplasmic_Binding_Protein_Type_1 37..432 CDD:299141
ANF_receptor 57..398 CDD:279440
Periplasmic_Binding_Protein_Type_2 446..815 CDD:304360 89/426 (21%)
Lig_chan 577..846 CDD:278489 62/315 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591207
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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