DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and si:ch211-251b21.1

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001138274.1 Gene:si:ch211-251b21.1 / 571720 ZFINID:ZDB-GENE-060809-5 Length:458 Species:Danio rerio


Alignment Length:446 Identity:100/446 - (22%)
Similarity:167/446 - (37%) Gaps:92/446 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 TVVTQRPLTLS-DDELIRF-----------LSQENDTHIDSLARFGFHLTLILRDLLHCKMKFIF 262
            |.:.:.|..:| ..||..|           |..:.|.|:....|:|               |...
Zfish    28 TTIKEEPYAMSKGSELEGFCIDMLSAISNKLGFKYDVHLVKDGRYG---------------KTDD 77

  Fly   263 SDSWSKSDVVGGSVGAVVDQTADLTATPSLATEGRLKYLSAIIETG--FFRSVCIFRTPHNAGLR 325
            |.:|:      |.:|.||...||:...|...|..|    .|:::..  |.::...|....:.|..
Zfish    78 SGNWN------GMIGEVVRGEADIAVAPLTLTAQR----EAVVDMSKPFMQTGLSFIMRKDLGSD 132

  Fly   326 GDVF---LQPFSPLVWYLFGGVLSLIGVLLWITFYMECKRMQKRWRLDYLP-------SLLSTFL 380
            ...|   |:.||..:|.   ||| :..:|..|..::..:.....|.   .|       :|..:|.
Zfish   133 DSQFLSLLKLFSTEMWM---GVL-VAYLLTSICIFLVSRISPCEWE---QPEKDNNSFTLSHSFW 190

  Fly   381 ISFGAACIQSSSLIPRSAGGRLIYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLA-ES 444
            .:.||..:|.:...|::..||:|....::.|.::...|.:.:...|.|...:..|||...|| ::
Zfish   191 YTVGALTLQGAGPHPKALSGRVITSIWWIFSLVLLACYFANLSLWLHSDNQQLSIKTFEDLANQN 255

  Fly   445 SLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKIESQTQNPELWLPAEQGVLRVRDNPGYVYVFETS 509
            .:..|......:.::...|..|..|...:...|:|:.:    |.|.:|..|.:.. .|.::.|:.
Zfish   256 VIEYGTIKDSSSFNFFKNSNNPTYHRIYEHIKEAQSYS----LNAAEGFRRAQKG-NYAFIGESV 315

  Fly   510 SGYAYVERYFTAQEICDLNEVLFRPEQL----FYTHLHRNSTYKELFRLRFLRILETGVYRKQRS 570
            |....|.||      |:|...   ||.:    :.......|...:...:..||:.|:|.....||
Zfish   316 SLDLAVARY------CNLTRA---PEIIGMRGYSIAAPLGSPLIKNLSVAILRLSESGELDYFRS 371

  Fly   571 YWVHMKLHCVAQNFVITVGMEYVAPL--------LLMLICADILVVVILLVELAWK 618
            .|  ....|||::   :.|    |||        .|:|.....|.:.:.|:|||.|
Zfish   372 KW--WASSCVAKD---SKG----APLKPASLKGVFLLLAFGLGLGIFLALMELAAK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 63/285 (22%)
si:ch211-251b21.1NP_001138274.1 PBP2_iGluR_non_NMDA_like 25..375 CDD:270403 85/394 (22%)
Lig_chan 146..396 CDD:278489 61/279 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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