DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and grin3ba

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_021323058.1 Gene:grin3ba / 566411 ZFINID:ZDB-GENE-070912-354 Length:1118 Species:Danio rerio


Alignment Length:498 Identity:97/498 - (19%)
Similarity:181/498 - (36%) Gaps:126/498 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 LRVATVVTQRPLTLS---DDE----------------------LIRFLSQENDTHIDSLAR---F 242
            |||.|:| :.|...:   |:|                      |.|.|.|.|.:.:.:..|   :
Zfish   458 LRVVTLV-EHPFVFTREVDEEGQCPAGQLCLDPQTNNSEVLNQLFRELEQTNSSSLPTDMRKCCY 521

  Fly   243 GFHLTLI--LRDLLHCKMK-FIFSD----SWSKSDVVGGSVGAVVDQTADLTATPSLATEGRLKY 300
            |:.:.|:  |.:.:|.:.. :|..|    :| |.....|.||.::...||:..|.......|   
Zfish   522 GYCIDLLEKLAEDMHFEFDLYIVGDGKYGAW-KGGRWSGLVGDLLSGVADMAVTSFSINSAR--- 582

  Fly   301 LSAIIE--TGFFRSV--CIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIGV-LLWITFYMEC 360
             |.:|:  :.||.:.  .:.|:...|...| .|:.   ||.|.::.|:...:.: .|:||.|   
Zfish   583 -SRVIDFTSPFFSTSLGILVRSKDTAAPIG-AFMW---PLHWSMWVGIFVALHITALFITLY--- 639

  Fly   361 KRMQKRWR---------------LDYLPSLLSTFLISFGAACIQSSSLIPRSAGGRLIYFALFLI 410
                 .|.               ..|..:|...:.|.||...   :|..|:...||.:.....:.
Zfish   640 -----EWNSPFGMTPHGRNRIRVFSYSSALNLCYAILFGRTV---ASKTPKCWTGRFLMNLWAIF 696

  Fly   411 SFIMYNYYTSVVVSSLLSSPVKSKIKTMR--QLAESSL--TVGLEPLPFTKSYLNYSRLPEIHLF 471
            ..::.:.||:.:.:.::......::..:.  :|...||  ..|.......:.|:..| .||:|.:
Zfish   697 CLLVLSSYTANLAAVMVGEKTFEEVSGIHDVKLHHPSLGFRFGTVRESSAEDYVKKS-FPEMHEY 760

  Fly   472 IKRKIESQTQNPELWLPAEQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQEICDL--------- 527
            ::|..:..|.:         ||..::.:|..:..|....  |.::...:....|.|         
Zfish   761 MRRFNKPTTPD---------GVSTLKTDPPQLDAFIMDK--ALLDYEVSIDADCKLLTVGKPFAI 814

  Fly   528 ---------NEVLFRPEQLFYTHLHRNSTYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQN 583
                     |..|.| ....|...:::..|.::...::.:::..|    :|.:.|...|....|:
Zfish   815 EGYGIGLPQNSPLTR-NVSEYVSRYKSDGYMDMLHDKWYKVVPCG----KRVFAVTETLQMGIQH 874

  Fly   584 FVITVGMEYVAPLLLMLICADIL-VVVILLVELAWKRFFTRHL 625
            |          ..|.:|:|..:. .::.||.|.|:.||...||
Zfish   875 F----------SGLFVLLCVGVAGALLTLLGEHAFFRFILPHL 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 49/303 (16%)
grin3baXP_021323058.1 Periplasmic_Binding_Protein_Type_1 26..428 CDD:324556
PBP2_iGluR_NMDA_Nr3 457..852 CDD:270438 80/427 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591227
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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