DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and grin2aa

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_021329529.1 Gene:grin2aa / 563297 ZFINID:ZDB-GENE-070424-129 Length:1460 Species:Danio rerio


Alignment Length:675 Identity:116/675 - (17%)
Similarity:215/675 - (31%) Gaps:236/675 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QFMKPIHPILVYHQFVQMRGVLNWSHLELSYM--GH-TQPTLAIYVDIKCDQTQDLLEEASREQI 100
            |..|...|....|:::..   :.|...:||:.  |: ..|.|.:.|                   
Zfish   320 QMEKTKLPPSALHKYMMN---VTWDGKDLSFTEDGYQVHPKLVVIV------------------- 362

  Fly   101 YNQHYHWLLVG---NQSKLEFYDLFGLFNISIDADVSYVKEQIQDNNDSVAYAVHDVYNNGKIIG 162
            .|:...|..:|   |||....|.::..||...||:.        |:|                  
Zfish   363 LNKDREWEKMGKWENQSLTLKYPVWPRFNSFGDAET--------DDN------------------ 401

  Fly   163 GQLNVTGSHEMSCDPFVCRRTRHLSSLQKRSKYGNREQLTDVVLRVATVVTQRPLTLSDDELIRF 227
             .|.:....|   .|||.              ..|.|:||...:|.:....:.   :.|:     
Zfish   402 -HLTIVTLEE---KPFVI--------------VENVERLTGTCMRNSVPCRKH---IKDN----- 440

  Fly   228 LSQENDTHIDSLARFGFHLTLILRDLLHCKMKF----IFSDSWSK--SDVVGGSVGAVVDQTADL 286
            .::...|:|....: ||.:.::.:...:.|..:    :.:....|  ::|..|.||.||::.|.:
Zfish   441 TTEGGGTYIKKCCK-GFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVNKKAVM 504

  Fly   287 TATPSLATEGR---LKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLI 348
            ........|.|   :.:....:|||.  ||.:.|:  |..:....||:|||..||.:...:|.|:
Zfish   505 AVGSLTINEERSEVIDFSVPFVETGI--SVMVSRS--NGTVSPSAFLEPFSASVWVMMFVMLLLV 565

  Fly   349 GVLLWITF----------------------YMECKRMQKRWRLDYLPSL--------LSTFLISF 383
            ..:....|                      :...|.:...|.|.:..|:        .|.|::|.
Zfish   566 TAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSV 630

  Fly   384 GAACIQSSSLIPRSAGGRLIYFA-LFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAESSLT 447
            .|                  :|| :||.|      ||:.:.:.::......::            
Zfish   631 WA------------------FFAVIFLAS------YTANLAAFMIQEEFVDQV------------ 659

  Fly   448 VGLEPLPFTKSYLNYS-------------------RLPEIHLFIKRKIESQTQNPELWLPA---- 489
            .||....|...| :||                   ..|::|.::.:..::...:..:.|..    
Zfish   660 TGLSDKKFQSPY-SYSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQTGVNDALVSLKTGKLD 723

  Fly   490 ---------------EQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQEICDLNEVLFRPEQLFY 539
                           ::|...|....||::   .::||...                        
Zfish   724 AFIYDAAVLNYMAGRDEGCKLVTIGSGYIF---ATTGYGIA------------------------ 761

  Fly   540 THLHRNSTYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQNFVIT--VGMEYVAPLLLMLIC 602
              |.:.|.:|....|..|.|:..|...:..:.|:....| ..:|.|::  :.::.:|.:..||..
Zfish   762 --LQKGSLWKRPVDLAILAIIGDGEMEELEAQWLTGICH-NEKNEVMSSQLDVDNMAGVFYMLAT 823

  Fly   603 ADILVVVILLVELAWKRFFTRHLTF 627
            |    :.:.|:...|:..|...|.:
Zfish   824 A----MGLSLITFVWEHLFYWRLRY 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 49/336 (15%)
grin2aaXP_021329529.1 PBP1_iGluR_NMDA_NR2 33..389 CDD:107373 18/90 (20%)
PBP2_iGluR_NMDA_Nr2 400..799 CDD:270436 83/514 (16%)
NMDAR2_C 836..1460 CDD:313729 2/9 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591191
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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