DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and grid2

DIOPT Version :10

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:495 Identity:96/495 - (19%)
Similarity:190/495 - (38%) Gaps:130/495 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 YGNREQLTD---------VVLRVATVVTQRPLTLSDDELI----RFLSQENDTHIDSLARF-GFH 245
            :|....|||         |||||.||: :.|..:..:.::    ::.....|. :|:||.: ||.
Zfish   423 HGLNGTLTDRKLENNMRGVVLRVVTVL-EEPFVMVSENVLGKPKKYQGFSIDV-LDALANYLGFK 485

  Fly   246 LTLILRDLLHCKMKFIFSD----------SWSKSDVVGGSVGAVVDQTAD-----LTATPSLA-- 293
            ..:           ::..|          :|:      |.:|.:|.:.||     ||.||...  
Zfish   486 YEI-----------YVAPDHKYGSQQADGTWN------GLIGELVFKRADVGLSALTITPERESV 533

  Fly   294 ---TEGRLKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIGVLLWIT 355
               |...:.|...::.....|:|.:|           ..|.||...:|....|.:.|:|.|:::.
Zfish   534 VDFTTRYMDYSVGVLLRKAERTVDMF-----------ACLAPFDLSLWACIAGTVLLVGTLVYLL 587

  Fly   356 FYMECKRMQKRWRLDYLPSLLSTFLIS-----FGAACIQSSSLIPRSAGGRLIYFALFLISFIMY 415
            .::...|:.       :.|:.||.|.:     :|:...|...:...:...|::....:|.:.|:.
Zfish   588 NWLNPPRLP-------MGSVSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVI 645

  Fly   416 NYYTSVVVSSLLSSPVKSKIKTMRQLAESSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKIESQT 480
            :.||:.:.:.|..|.:::.|::::.||:.:      .||: .:.|:.:        :..::.|:.
Zfish   646 SSYTANLAAFLTISRIENSIQSLQDLAKQT------DLPY-GTVLDSA--------VYDQVRSKG 695

  Fly   481 QNP--------ELWL-------------PAEQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQEI 524
            .||        ::|.             .:::|:.:|:.. .:.:|::.    |.:|......|.
Zfish   696 MNPFERDPMYSQMWRMINRTGGAENNVEESKEGIRKVKYG-RFAFVWDA----AVLEYVAINDED 755

  Fly   525 CDL----NEVLFRPEQLFYTHLHRNSTYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQNFV 585
            |.|    |.|..|...:...|   .|.|:::|..|.|.:.:.|.....:..|......|...:.|
Zfish   756 CSLYTVSNNVADRGYGMAMQH---GSPYRDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYSPV 817

  Fly   586 IT------VGMEYVAPLLLMLICADILVVVILLVELAWKR 619
            .|      :.:...|.:..:|....:|..:|..||..|.|
Zfish   818 GTRKSGSALDIHSFAGVFFVLAAGVVLSCLIATVETWWTR 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Periplasmic_Binding_Protein_Type_2 455..572 CDD:473866 23/141 (16%)
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..429 CDD:380614 1/5 (20%)
PBP2_iGluR_delta_2 440..806 CDD:270449 81/425 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.

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