DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75a and grid2

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:495 Identity:96/495 - (19%)
Similarity:190/495 - (38%) Gaps:130/495 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 YGNREQLTD---------VVLRVATVVTQRPLTLSDDELI----RFLSQENDTHIDSLARF-GFH 245
            :|....|||         |||||.||: :.|..:..:.::    ::.....|. :|:||.: ||.
Zfish   423 HGLNGTLTDRKLENNMRGVVLRVVTVL-EEPFVMVSENVLGKPKKYQGFSIDV-LDALANYLGFK 485

  Fly   246 LTLILRDLLHCKMKFIFSD----------SWSKSDVVGGSVGAVVDQTAD-----LTATPSLA-- 293
            ..:           ::..|          :|:      |.:|.:|.:.||     ||.||...  
Zfish   486 YEI-----------YVAPDHKYGSQQADGTWN------GLIGELVFKRADVGLSALTITPERESV 533

  Fly   294 ---TEGRLKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIGVLLWIT 355
               |...:.|...::.....|:|.:|           ..|.||...:|....|.:.|:|.|:::.
Zfish   534 VDFTTRYMDYSVGVLLRKAERTVDMF-----------ACLAPFDLSLWACIAGTVLLVGTLVYLL 587

  Fly   356 FYMECKRMQKRWRLDYLPSLLSTFLIS-----FGAACIQSSSLIPRSAGGRLIYFALFLISFIMY 415
            .::...|:.       :.|:.||.|.:     :|:...|...:...:...|::....:|.:.|:.
Zfish   588 NWLNPPRLP-------MGSVSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVI 645

  Fly   416 NYYTSVVVSSLLSSPVKSKIKTMRQLAESSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKIESQT 480
            :.||:.:.:.|..|.:::.|::::.||:.:      .||: .:.|:.:        :..::.|:.
Zfish   646 SSYTANLAAFLTISRIENSIQSLQDLAKQT------DLPY-GTVLDSA--------VYDQVRSKG 695

  Fly   481 QNP--------ELWL-------------PAEQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQEI 524
            .||        ::|.             .:::|:.:|:.. .:.:|::.    |.:|......|.
Zfish   696 MNPFERDPMYSQMWRMINRTGGAENNVEESKEGIRKVKYG-RFAFVWDA----AVLEYVAINDED 755

  Fly   525 CDL----NEVLFRPEQLFYTHLHRNSTYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQNFV 585
            |.|    |.|..|...:...|   .|.|:::|..|.|.:.:.|.....:..|......|...:.|
Zfish   756 CSLYTVSNNVADRGYGMAMQH---GSPYRDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYSPV 817

  Fly   586 IT------VGMEYVAPLLLMLICADILVVVILLVELAWKR 619
            .|      :.:...|.:..:|....:|..:|..||..|.|
Zfish   818 GTRKSGSALDIHSFAGVFFVLAAGVVLSCLIATVETWWTR 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 53/301 (18%)
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..427 CDD:107386 1/3 (33%)
ANF_receptor 42..404 CDD:279440
PBP2_iGluR_delta_2 440..806 CDD:270449 81/425 (19%)
Lig_chan 568..841 CDD:278489 53/302 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591203
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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