DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and Ekar

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster


Alignment Length:750 Identity:140/750 - (18%)
Similarity:275/750 - (36%) Gaps:192/750 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QLANFVLDNLVQ----SRIGFIVLFHCWQSDESLKFAQQFMKPIHPILVYHQFVQMRGVLNWSHL 65
            ||.|:..::::|    :|.|   :.|  :.:..:....|..:.      :|..|.||.|...|::
  Fly   131 QLVNYAFNDVIQYLNWTRFG---ILH--EKENGIINLHQLSRS------FHGEVHMRQVSRDSYV 184

  Fly    66 EL--SYMG---HTQPTLAIYVDIKCDQTQDLLEEASREQIYNQHYHWLLVGNQSKLEFYDL---- 121
            ..  .:.|   |.     |.:|...:....||:...::|:....||:|.  ....||.|||    
  Fly   185 SALNEFKGKEIHN-----IIIDTNSNGISILLKNILQQQMNEYKYHYLF--TSFDLETYDLEDFK 242

  Fly   122 FGLFNIS----ID-ADVSYVKEQIQDNNDSVAYAVHDVYNNGKIIGGQLNVTGSHEMSCDPFV-- 179
            :...||:    :| |||. ||:.::|    :....|.::....:   .|::..|..:..:|.:  
  Fly   243 YNFVNITSFRLVDTADVG-VKQILKD----IGLYSHHIFKKPYL---NLHIKKSTILESEPALMF 299

  Fly   180 ------------CRRTRHLS----SLQKRSKYGNREQLTDVVLRVATVVTQRPLTLSDDELIRF- 227
                        ..::..|:    |.::.:.:.....|.:.:..|.......|:...|.:.::| 
  Fly   300 DSVYVFAIGLQTLEQSHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQFK 364

  Fly   228 -----LSQENDTHIDSLARFG---------------FHLTLILRDLL-------HCKMKFIFSDS 265
                 |.|.:...:......|               .::||::..:|       |....|..::.
  Fly   365 LDLIKLKQHSIVKVGEWTPHGHLNITEPSMFFDAGSMNVTLVVITILETPYVMMHYGKNFTGNER 429

  Fly   266 W------------------------------SKSDVVG---GSVGAVVDQTADL---TATPSLAT 294
            :                              :|....|   |.|..::...|||   :.|.:.|.
  Fly   430 FYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYAR 494

  Fly   295 EGRLKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIG-VLLWITFYM 358
            |..:.:....:..|.  |: :|:.|.:...|...|:.|.:..:|     :..||. .|:.:..|:
  Fly   495 ESVIDFTKPFMNLGI--SI-LFKVPTSEPTRLFSFMNPLAIEIW-----IYVLIAYFLVSLCIYI 551

  Fly   359 ECKRMQKRWR------LDYLP-----SLLSTFLISFGAACIQSSSLIPRSAGGRLIYFALFLISF 412
            ..|.....|:      |:.:.     ||..:|..:.|....||..:.||:...|:|.......|.
  Fly   552 VGKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSL 616

  Fly   413 IMYNYYTSVVVSSLLSSPVKSKIKTMRQLA-ESSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKI 476
            |:...||:.:.:.|.:..:.:.|:....|| ::.::.|......|.::...|.: |.:..|.|.:
  Fly   617 IIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMTFFRDSVI-ETYKKIWRSM 680

  Fly   477 ESQTQNPELWLPA-EQGVLRVRDNPG-YVYVFETSSGYAYVERYFTAQEICDLNEV--------- 530
            ::  :.|..:... |.|:.||  |.| |.::.| |:...|:     .|..|:|.::         
  Fly   681 DN--KKPSAFTTTYEDGIKRV--NQGNYAFLME-STMLDYI-----VQRDCNLTQIGGLLDTKGY 735

  Fly   531 -LFRPEQLFYTHLHRNSTYKELFRLRFLRILETG----VYRKQRSYWVHMKLHCVAQNF-----V 585
             :..|         :.|.:::...|..|.:.|.|    :|.|   :|.:....|..:|.     .
  Fly   736 GIATP---------KGSPWRDKISLAILELQERGDIQMLYDK---WWKNTDETCTRKNTSKQSKA 788

  Fly   586 ITVGMEYVAPLLLMLICADILVVVILLVELAWKRF 620
            .::|:|.:..:.::||...|:..|:...|. |..|
  Fly   789 NSLGLESIGGVFVVLIAGIIVAAVVAFFEF-WYNF 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 61/299 (20%)
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 52/282 (18%)
ANF_receptor 39..371 CDD:279440 49/265 (18%)
PBP2_iGluR_Kainate 402..771 CDD:270432 76/399 (19%)
Lig_chan 533..807 CDD:278489 61/301 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462802
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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