DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and KaiR1D

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster


Alignment Length:696 Identity:134/696 - (19%)
Similarity:252/696 - (36%) Gaps:192/696 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 ELSYMGHTQPTLA---------IYVDIKCDQTQDLLEEASREQIYNQHYHWLLVGNQSKLEFYDL 121
            :||..|..:|.|.         |.:|...::..::|::|.:..:.:.::.:|:    :.|:.:.:
  Fly   191 QLSDSGDYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLV----TSLDLHTV 251

  Fly   122 ------FGLFNI------------------SID-------ADVSYVKEQIQDNNDSV---AYAVH 152
                  :|..||                  |||       |:::.|:.:.....|:|   |.|:|
  Fly   252 NLDEFRYGGTNITGFRLINEKIVSDVVRQWSIDEKGLLRSANLTTVRSETALMYDAVHLFAKALH 316

  Fly   153 DVYNNGKIIGGQLNVTGSHEMSCDPFVCRRT-RHLSSLQKRSKYGNREQLTDVV------LR--- 207
            |:..:.:|        ..|.:|||.   :.| :|..||....|....:.||:|:      .|   
  Fly   317 DLDTSQQI--------DIHPISCDG---QSTWQHGFSLINYMKIVEMKGLTNVIKFDHQGFRTDF 370

  Fly   208 VATVVTQRPL----------TLSDD-ELIRFLSQENDTHIDSLARFGFHLTLILR---------- 251
            :..:|...|.          ||.|. ...|..||:......:|......:|.||.          
  Fly   371 MLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTTILSNPYCMRKESA 435

  Fly   252 --------------DLLH---------CKMKFIFSDSW-SKSDVVG---GSVGAVVDQTADLT-- 287
                          ||:|         .|::.:...|: |.:.:.|   |.:..:::|.|||.  
  Fly   436 IPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQRADLAIA 500

  Fly   288 -ATPSLATEGRLKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIGVL 351
             .|.:...|..:.:.:..:..|.  |: ::|.|.........||.|.|..||.........:.||
  Fly   501 DLTITFEREQAVDFTTPFMNLGV--SI-LYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVL 562

  Fly   352 LWITFYMECKRMQKRW---------RLDYLPSLLSTFLISFGAACIQSSSLIPRSAGGRLIYFAL 407
            |:|.    .|.....|         :::...:||:....:.|:...|....:|::...|::....
  Fly   563 LFIL----AKFTPYEWPAYTDAHGEKVESQFTLLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIW 623

  Fly   408 FLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAE------SSLTVGLEPLPFTKSYLN-YSRL 465
            :..:.||.:.||:.:.:.|....:.|.|::...||:      .:|..|.....|..|.:: |.|:
  Fly   624 WFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTRIKYGALKGGSTAAFFRDSKISTYQRM 688

  Fly   466 PEIHLFIKRKIESQTQNPELWLPAE-QGVLRVRDNPG-YVYVFETSSGYAYVERYFTAQEICDLN 528
            ...         .::..|.::..:. :||.||....| |.::.|::|    :|  :..:..|:|.
  Fly   689 WSF---------MESARPSVFTASNGEGVERVAKGKGSYAFLMESTS----IE--YVTERNCELT 738

  Fly   529 EV----------LFRPEQLFYTHLHRNSTYKELFRLRFLRILETGVYRKQRSYW----------- 572
            :|          :..|.         ||.|:.......|::.|.|.....::.|           
  Fly   739 QVGGMLDTKSYGIATPP---------NSPYRTAINSVILKLQEEGKLHILKTKWWKEKRGGGKCR 794

  Fly   573 VHMKLHCVAQNFVITVGMEYVAPLLLMLICADILVVVILLVELAWK 618
            |.......|.|   .:|:..|..:.::|:....:..||.:.|..||
  Fly   795 VETSKSSSAAN---ELGLANVGGVFVVLMGGMGVACVIAVCEFVWK 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 56/304 (18%)
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 44/220 (20%)
ANF_receptor 42..378 CDD:279440 40/201 (20%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 75/400 (19%)
Lig_chan 547..823 CDD:278489 56/306 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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