DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and GRIN2C

DIOPT Version :10

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_054171851.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1265 Species:Homo sapiens


Alignment Length:803 Identity:148/803 - (18%)
Similarity:272/803 - (33%) Gaps:283/803 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLFHCWQSDESLKFAQQFMKPIHPILVYHQFVQ-MRGVLNWSH----------LELSYMG---HT 73
            |||...:..:...||  .:..:||  .:..|:: :|.|.:.||          |||...|   .|
Human   152 VLFKVLEEYDWSAFA--VITSLHP--GHALFLEGVRAVADASHVSWRLLDVVTLELGPGGPRART 212

  Fly    74 Q--------PTLAIYVDIKC--DQTQDLLEEASREQIYNQHYHWLL----VGNQSKLEFYDLFGL 124
            |        |....|    |  ::.:.|..||::..:....:.||:    :|:..........||
Human   213 QRLLRQLDAPVFVAY----CSREEAEVLFAEAAQAGLVGPGHVWLVPNLALGSTDAPPATFPVGL 273

  Fly   125 FNISIDADVSYVKEQIQDNNDSVAYAVHDVYNN---------------GKIIGGQ-------LNV 167
            .::..::....::::::|....:|...|..:..               |.:...:       |||
Human   274 ISVVTESWRLSLRQKVRDGVAILALGAHSYWRQHGTLPAPAGDCRVHPGPVSPAREAFYRHLLNV 338

  Fly   168 T-GSHEMSCDP--FVCRRTRHLSSLQKRSKYGNREQLTDVVLR-------------------VAT 210
            | ...:.|..|  ::.:.|..:.:|       ||.:|.::|.|                   :..
Human   339 TWEGRDFSFSPGGYLVQPTMVVIAL-------NRHRLWEMVGRWEHGVLYMKYPVWPRYSASLQP 396

  Fly   211 VVTQRPLTLSDDELIRFL--------------------SQENDTH-----------------IDS 238
            ||..|.||::..|...|:                    .|.|.|.                 ||.
Human   397 VVDSRHLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI 461

  Fly   239 L------ARFGFHLTLILRDLLHCKMKFIFSDSWSKSDVVGGSVGAVVDQTADLTATPSLATEGR 297
            |      .:|.:.|.|:.......:::.:    |:      |.:|.|..:.||:........|.|
Human   462 LKKLARVVKFSYDLYLVTNGKHGKRVRGV----WN------GMIGEVYYKRADMAIGSLTINEER 516

  Fly   298 ---LKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVW---------------YLF--- 341
               :.:....:|||.  ||.:.|:  |..:....||:|:||.||               ::|   
Human   517 SEIVDFSVPFVETGI--SVMVARS--NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYF 577

  Fly   342 ---------------GGVLSLIGVLLWITFYMECKRMQKRWRLDYLPSLLSTFLISFGAACIQSS 391
                           ||....||..:|:.           |.|.:..|:           .|:: 
Human   578 SPVSYNQNLTRGKKSGGPAFTIGKSVWLL-----------WALVFNNSV-----------PIEN- 619

  Fly   392 SLIPRSAGGRL--IYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAE-SSL---TVGL 450
               ||....::  :.:|.|.:.|:.  .||:.:.:.::.   :..|.|:..|:: .||   ..|:
Human   620 ---PRGTTSKIMVLVWAFFAVIFLA--SYTANLAAFMIQ---EQYIDTVSGLSDKKSLHLENTGV 676

  Fly   451 EPLPFTKSYLNYSRLPE----------------------------IHL--FIKRKIESQTQNPEL 485
            ....|.....:|.:.|:                            .|:  |.:|.:|....:.::
Human   677 AWTAFKTFCSDYFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKM 741

  Fly   486 WLPAEQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQ-EICDLNEVLFRPEQLFYT-----HLHR 544
            ...| |.|.|..|    .::::     |.|..|...: |.|.|  |.....::|.|     .:.:
Human   742 GSEA-QPVPRKLD----AFIYD-----AAVLNYMAGKDEGCKL--VTIGSGKVFATTGYGIAMQK 794

  Fly   545 NSTYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQN-----FVITVGMEYVAPLLLMLICAD 604
            :|.:|....|..|:.|..|..:|..:.|    |..:.||     ....:.::.:|.:..||:.| 
Human   795 DSHWKRAIDLALLQFLGDGETQKLETVW----LSGICQNEKNEVMSSKLDIDNMAGVFYMLLVA- 854

  Fly   605 ILVVVILLVELAWKRFFTRHLTF 627
               :.:.|:..||:     ||.:
Human   855 ---MGLALLVFAWE-----HLVY 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Periplasmic_Binding_Protein_Type_2 455..572 CDD:473866 28/152 (18%)
GRIN2CXP_054171851.1 PBP1_iGluR_NMDA_NR2 28..384 CDD:380601 46/246 (19%)
PBP2_iGluR_NMDA_Nr2 400..829 CDD:270436 89/489 (18%)
NMDAR2_C 866..>941 CDD:463148 2/4 (50%)

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