DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and GRIN2B

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_000825.2 Gene:GRIN2B / 2904 HGNCID:4586 Length:1484 Species:Homo sapiens


Alignment Length:447 Identity:81/447 - (18%)
Similarity:158/447 - (35%) Gaps:124/447 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 IDSLARFGFHLTLILRDLLHCKMKFIFSDSWSKSDVVGGSVGAVVDQTADLTATPSLATEGR--- 297
            |....:|.:.|.|:... .|.|.   .:.:|:      |.:|.||.:.|.:........|.|   
Human   468 ISKSVKFTYDLYLVTNG-KHGKK---INGTWN------GMIGEVVMKRAYMAVGSLTINEERSEV 522

  Fly   298 LKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIGVLLWITF------ 356
            :.:....||||.  ||.:.|:  |..:....||:|||..||.:...:|.::..:....|      
Human   523 VDFSVPFIETGI--SVMVSRS--NGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPV 583

  Fly   357 -YMEC---------------KRMQKRWRLDYLPSLLSTFLISFGAACIQSSSLIPRSAGGRLI-- 403
             |..|               |.:...|.|.:..|:           .:|:    |:....:::  
Human   584 GYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSV-----------PVQN----PKGTTSKIMVS 633

  Fly   404 YFALFLISFIMYNYYTSVVVSSLLSSPVKSKI-----KTMRQLAESS--LTVGLEPLPFTKSYL- 460
            .:|.|.:.|:.  .||:.:.:.::......::     |..::..:.|  ...|..|...|:..: 
Human   634 VWAFFAVIFLA--SYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIR 696

  Fly   461 -NYSRLPEIHLFIKRKIESQTQNPELWLPA-------------------EQGVLRVRDNPGYVYV 505
             ||:   |:|.::.:..:....:..|.|..                   ::|...|....|.|: 
Human   697 NNYA---EMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVF- 757

  Fly   506 FETSSGYAYVERYFTAQEICDLNEVLFRPEQLFYTHLHRNSTYKELFRLRFLRILETGVYRKQRS 570
              .|:||...                          :.::|.:|....|..|::...|...:..:
Human   758 --ASTGYGIA--------------------------IQKDSGWKRQVDLAILQLFGDGEMEELEA 794

  Fly   571 YWVHMKLHCVAQNFVIT--VGMEYVAPLLLMLICADILVVVILLVE-LAWKRFFTRH 624
            .|:....| ..:|.|::  :.::.:|.:..||..|..|.::..:.| |.:.:|  ||
Human   795 LWLTGICH-NEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFICEHLFYWQF--RH 848

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 47/319 (15%)
GRIN2BNP_000825.2 PBP1_iGluR_NMDA_NR2 33..393 CDD:107373
PBP2_iGluR_NMDA_Nr2 403..803 CDD:270436 69/398 (17%)
HisJ <459..>542 CDD:223904 21/87 (24%)
Lig_chan 557..829 CDD:278489 47/321 (15%)
Pore-forming. /evidence=ECO:0000250|UniProtKB:A7XY94 604..623 5/33 (15%)