DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir75a and GRIN2A

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:595 Identity:104/595 - (17%)
Similarity:199/595 - (33%) Gaps:176/595 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 LFNISIDA-DVSYVKEQIQDNNDSVAYAVHD-----VYNNGKIIGGQLNVTG---SHEMSCDPFV 179
            :.|::.|. |:|:.:|         .|.||.     |.|..:    :....|   :|.:|....|
Human   390 MVNVTWDGKDLSFTEE---------GYQVHPRLVVIVLNKDR----EWEKVGKWENHTLSLRHAV 441

  Fly   180 CRRTRHLSSLQKRSKYGNREQLTDVVLRVATVVTQRPLTLSDDELIR-------FLSQENDTH-- 235
            ..|.:..|..:....:     |:.|.|..|..|....:....:..:|       |:...|.|:  
Human   442 WPRYKSFSDCEPDDNH-----LSIVTLEEAPFVIVEDIDPLTETCVRNTVPCRKFVKINNSTNEG 501

  Fly   236 -----------IDSL------ARFGFHLTLILRDLLHCKMKFIFSDSWSKSDVVGGSVGAVVDQT 283
                       ||.|      .:|.:.|.|:... .|.|         ..::|..|.:|.||.|.
Human   502 MNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNG-KHGK---------KVNNVWNGMIGEVVYQR 556

  Fly   284 ADLTATPSLATEGR---LKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVL 345
            |.:........|.|   :.:....:|||.  ||.:.|:  |..:....||:|||..||.:...:|
Human   557 AVMAVGSLTINEERSEVVDFSVPFVETGI--SVMVSRS--NGTVSPSAFLEPFSASVWVMMFVML 617

  Fly   346 SLIGVLLWITF-YME---CKRMQKRWRLDYLPSL-------LSTFLISFGAACIQSSSLIPRSAG 399
            .::..:....| |..   ..|...:.:..:.||.       |...|:...:..:|:    |:...
Human   618 LIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQN----PKGTT 678

  Fly   400 GRLI--YFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAESSLTVGLEPLPFTKSYLNY 462
            .:::  .:|.|.:.|:.  .||:.:.:.::......::            .||....|.:.: :|
Human   679 SKIMVSVWAFFAVIFLA--SYTANLAAFMIQEEFVDQV------------TGLSDKKFQRPH-DY 728

  Fly   463 S-------------------RLPEIHLFIKRKIESQTQNPELWLPA------------------- 489
            |                   ..|.:|.::.:..:...::..:.|..                   
Human   729 SPPFRFGTVPNGSTERNIRNNYPYMHQYMTKFNQKGVEDALVSLKTGKLDAFIYDAAVLNYKAGR 793

  Fly   490 EQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQEICDLNEVLFRPEQLFYTHLHRNSTYKELFRL 554
            ::|...|....||::   .::||...                          |.:.|.:|....|
Human   794 DEGCKLVTIGSGYIF---ATTGYGIA--------------------------LQKGSPWKRQIDL 829

  Fly   555 RFLRILETGVYRKQRSYWVHMKLHCVAQNFVIT--VGMEYVAPLLLMLICADILVVVILLVELAW 617
            ..|:.:..|...:..:.|:....| ..:|.|::  :.::.:|.:..||..|    :.:.|:...|
Human   830 ALLQFVGDGEMEELETLWLTGICH-NEKNEVMSSQLDIDNMAGVFYMLAAA----MALSLITFIW 889

  Fly   618 KRFFTRHLTF 627
            :..|...|.|
Human   890 EHLFYWKLRF 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 44/318 (14%)
GRIN2AXP_016878661.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155896
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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