DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and GRIK3

DIOPT Version :10

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:486 Identity:97/486 - (19%)
Similarity:188/486 - (38%) Gaps:124/486 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 GNREQLTDVVLRVATVVTQRPLTLSDDELIRFLSQENDTHIDSLARFGFHLTLILRDLLHC---- 256
            |....:||.:...:.:||    |:.::..:.|  :::|..:....||..:...:|::|.|.    
Human   422 GRGPNVTDSLTNRSLIVT----TVLEEPFVMF--RKSDRTLYGNDRFEGYCIDLLKELAHILGFS 480

  Fly   257 -KMKFIFSDSWSKSDVVG---GSVGAVVDQTADLTATPSLATEGRLKYLSAIIETGFFRSV---C 314
             :::.:....:...|..|   |.|..::|..|||...|...|..|.|   ||..:..|.::   .
Human   481 YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREK---AIDFSKPFMTLGVSI 542

  Fly   315 IFRTPHNAGLRGDVFLQPFSPLVW------YLFGGVLSLIGVLLWITFYMECKRMQKRWRLDYLP 373
            ::|.|:........||.|.||.:|      ||  ||..::.|:...:.|        .| .|..|
Human   543 LYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYL--GVSCVLFVIARFSPY--------EW-YDAHP 596

  Fly   374 ------------SLLSTFLISFGAACIQSSSLIPRSAGGRLI-----YFALFLISFIMYNYYTSV 421
                        :||::|....|:...|.|.|:|::...|:|     :|.|.:||     .||:.
Human   597 CNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIIS-----SYTAN 656

  Fly   422 VVSSLLSSPVKSKIKTMRQLAE------SSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKIESQT 480
            :.:.|....::|.|.:...||:      .::..|.....|.||.:  |...::..|:..|..:..
Human   657 LAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKI--STFEKMWAFMSSKPSALV 719

  Fly   481 QNPELWLPAEQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQEICDLNEV----------LFRPE 535
            :|      .|:|:.|.. ...|..:.|:::    :|  :..|..|:|.::          :..| 
Human   720 KN------NEEGIQRAL-TADYALLMESTT----IE--YVTQRNCNLTQIGGLIDSKGYGIGTP- 770

  Fly   536 QLFYTHLHRNSTYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQNF-------------VIT 587
                    ..|.|::...:..|::.|..            |||.:.:.:             ...
Human   771 --------MGSPYRDKITIAILQLQEED------------KLHIMKEKWWRGSGCPEEENKEASA 815

  Fly   588 VGMEYVAPLLLMLICADILVVVILLVELAWK 618
            :|::.:..:.::|....:|.|::.:.|..:|
Human   816 LGIQKIGGIFIVLAAGLVLSVLVAVGEFVYK 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Periplasmic_Binding_Protein_Type_2 455..572 CDD:473866 21/126 (17%)
GRIK3NP_000822.2 PBP1_iGluR_Kainate 37..417 CDD:380605
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 88/428 (21%)
Blue background indicates that the domain is not in the aligned region.

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