DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and GRIA2

DIOPT Version :10

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_000817.5 Gene:GRIA2 / 2891 HGNCID:4572 Length:883 Species:Homo sapiens


Alignment Length:677 Identity:126/677 - (18%)
Similarity:239/677 - (35%) Gaps:182/677 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 IYVDIKCDQTQDLLEEASREQIYNQHYHWLLV------GNQSKLEFYDLFGLFNIS----IDADV 133
            :.:|.:.|:..|::::......:.:.||:::.      |:..|::    ||..|:|    :|.|.
Human   207 VILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLKIQ----FGGANVSGFQIVDYDD 267

  Fly   134 SYV------------KEQIQDNNDSVAYAVHDVYN------------------------------ 156
            |.|            ||....:..::.|.....|:                              
Human   268 SLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGDCLA 332

  Fly   157 --------------------------------NGKIIGGQLNV-----TGSHEMSCDPFVCRRTR 184
                                            |||.|...:|:     .|..::.....|.:...
Human   333 NPAVPWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVV 397

  Fly   185 HLSSLQKRSKYGNREQLTDVVLRVATVVTQRPLTLSDDELIRFLSQENDTHIDSLARF-GFHLTL 248
            .|:.|...:.....|..|.||    |.:.:.|..         :.::|...::...|: |:.:.|
Human   398 TLTELPSGNDTSGLENKTVVV----TTILESPYV---------MMKKNHEMLEGNERYEGYCVDL 449

  Fly   249 ILRDLLHCKMKFIFSDSWSKSDVVG---------------GSVGAVVDQTADLTATP---SLATE 295
            ......||..|:       |..:||               |.||.:|...||:...|   :|..|
Human   450 AAEIAKHCGFKY-------KLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVRE 507

  Fly   296 GRLKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIGVLLWITFYMEC 360
            ..:.:....:..|.  |:.| :.|..:......||.|.:..:|...  |.:.|||.  :..::..
Human   508 EVIDFSKPFMSLGI--SIMI-KKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS--VVLFLVS 565

  Fly   361 KRMQKRWRLDYLP--------------SLLSTFLISFGAACIQSSSLIPRSAGGRLI-----YFA 406
            :.....|..:...              .:.::...|.||...|...:.|||..||::     :|.
Human   566 RFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFT 630

  Fly   407 LFLISFIMYNYYTSVVVSSLLSSPVKS--KIKTMRQLAESSLTVGLEPLPFTKSYLNYSRLPEIH 469
            |.:||....|....:.|..:: ||::|  .:....::|..:|..|     .||.:...|:   |.
Human   631 LIIISSYTANLAAFLTVERMV-SPIESAEDLSKQTEIAYGTLDSG-----STKEFFRRSK---IA 686

  Fly   470 LFIKRKIESQTQNPELWL-PAEQGVLRVRDNPG-YVYVFETSSGYAYVERYFTAQEICDLNEVLF 532
            :|.|.....::..|.::: ...:||.|||.:.| |.|:.|::     :..|...::.||..:|..
Human   687 VFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLEST-----MNEYIEQRKPCDTMKVGG 746

  Fly   533 RPEQLFY-THLHRNSTYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQNF-----VITVGME 591
            ..:...| ....:.|:.:....|..|::.|.||..|.::.|.:.|..|.|::.     ...:.:.
Human   747 NLDSKGYGIATPKGSSLRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLS 811

  Fly   592 YVAPLLLMLICADILVVVILLVELAWK 618
            .||.:..:|:....|.:::.|:|..:|
Human   812 NVAGVFYILVGGLGLAMLVALIEFCYK 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Periplasmic_Binding_Protein_Type_2 455..572 CDD:473866 28/119 (24%)
GRIA2NP_000817.5 PBP1_iGluR_AMPA_GluR2 28..398 CDD:380612 26/194 (13%)
PBP2_iGluR_AMPA 413..794 CDD:270433 88/421 (21%)
Required for interaction with IQSEC1. /evidence=ECO:0000250|UniProtKB:P19491 867..877
Blue background indicates that the domain is not in the aligned region.

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