DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and glr-7

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001337310.1 Gene:glr-7 / 180547 WormBaseID:WBGene00001618 Length:885 Species:Caenorhabditis elegans


Alignment Length:507 Identity:95/507 - (18%)
Similarity:183/507 - (36%) Gaps:126/507 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 SSLQKRS-KYGNREQLTDV----VLRVATVVTQRPLTLSDDELIRFLSQ--ENDTHIDSLARFGF 244
            |.:.|.| .||..:  .||    :.||.|:: |.|          |:.:  :.||..:     |:
 Worm   352 SPISKLSVMYGTLQ--VDVRNLNIFRVVTLI-QPP----------FVQRTGDPDTPYE-----GY 398

  Fly   245 HLTLILRDLLHCKMKFIFS------DSWSKSDVVG---GSVGAVVDQTADLTATP-SLATEGR-- 297
            .:.||  :::..::.|.::      .|:...|..|   |.:||:|..:||:...| |:..|..  
 Worm   399 CIDLI--NMIQVEVNFTYTIYEVEDGSFGTMDDNGNWNGLIGALVSGSADIALAPLSVMAEREND 461

  Fly   298 ----LKYLSAI----------IETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLI 348
                :.|...:          :|...|:.:.:...|                 ||..........
 Worm   462 VDFTVPYYDLVGTTILMKKADVEYSLFKFMKVLEWP-----------------VWLCIVAAYLFT 509

  Fly   349 GVLLWI-------TFYMECKRMQ----KRWRLDYLPSLLSTFLISFGAACIQSSSLIPRSAGGRL 402
            .:||||       :|....:|.|    ||..     ||.........:...|.....|::..|||
 Worm   510 SILLWIFDRFSPYSFTNNKERYQNDIEKRQF-----SLKECLWFCMTSLTPQGGGEAPKNISGRL 569

  Fly   403 IYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAESSLTVGLEPLPFTKSYLNYSRLPE 467
            :....:|..||:...||:.:.:.|..|.::..|.::..||: ...:...|:..:.|...:.|:.|
 Worm   570 VAATWWLFGFIIIASYTANLAAFLTVSRLEQPISSLDDLAK-QYKIEYAPIKGSASETYFRRMAE 633

  Fly   468 I----HLFIKRKIESQTQNP------------------ELWLPAEQGVLRVRDNPGYVYVFETSS 510
            |    :...|....:::.:|                  .:|...::..|.|..:.....|..:..
 Worm   634 IEETFYNMWKEMSLNESMSPRDRAKLAVWDYPVSDKFTNMWRYMQESKLPVNMDTAVDRVLNSVD 698

  Fly   511 GYAYV----ERYFTAQEICDLNEVLFRPEQLFYT------HLHRNSTYKELFRLRFLRILETGVY 565
            |:|::    |..:.|...|:|.:|.....:..|.      |:.::.....:..|...|.|||   
 Worm   699 GFAFIGDATEIKYAALTNCNLQQVGTEFSRKPYAIAVQSGHILKDKISSAILMLLNERRLET--- 760

  Fly   566 RKQRSYWVH--MKLHCV-AQNFVITVGMEYVAPLLLMLICADILVVVILLVE 614
             .:..:|..  .|:.|. :.:....:.::.:..:.::::....|.:|.|..|
 Worm   761 -LKEKWWTDNPNKVSCPDSSDESDGISIQNIGGVFIVILAGIALSIVTLAFE 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 56/311 (18%)
glr-7NP_001337310.1 Periplasmic_Binding_Protein_Type_1 <102..>220 CDD:324556
PBP2_iGluR_putative 373..767 CDD:270435 81/438 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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