DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and Grik5

DIOPT Version :10

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_030098003.1 Gene:Grik5 / 14809 MGIID:95818 Length:1003 Species:Mus musculus


Alignment Length:635 Identity:118/635 - (18%)
Similarity:213/635 - (33%) Gaps:211/635 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 FGLFNISIDADVSYVKE---QIQDNNDSVAY------------AVHDVYNNGKIIGGQLNVTGSH 171
            |.:||.|......:|:.   ..::|.::..|            |||      .::.....:..|.
Mouse   290 FSMFNTSHPFYPEFVRSLNMSWRENCEASTYPGPALSAALMFDAVH------VVVSAVRELNRSQ 348

  Fly   172 EMSCDPFVC----------------------------------RRTRHLSSLQKRSKYGNRE--- 199
            |:...|..|                                  :||.:...:.::|:.|:||   
Mouse   349 EIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGV 413

  Fly   200 --------------------QLTDVVLRVATV-----VTQRP--LTLSDDELIRFLSQENDTHID 237
                                .|.:..|.|.|:     |.:||  ..||.:|.......:....:.
Mouse   414 WYSNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALSGNERFEGFCVDMLRELA 478

  Fly   238 SLARFGFHLTLILRDLLHCKMKFIFSDSWSKSDVVGGSVGAVVD-QTADLTATPSLATEGRLKYL 301
            .|.||.:.|.|:...|......   :.||:      |.||.::: |.|||.......|..|.|.:
Mouse   479 ELLRFRYRLRLVEDGLYGAPEP---NGSWT------GMVGELINRQKADLAVAAFTITAEREKVI 534

  Fly   302 S----------AII-------ETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVW-YLFGGVLSLI 348
            .          :|:       :.|:|.                 ||.||||.|| ::....|::.
Mouse   535 DFSKPFMTLGISILYRVHMGRKPGYFS-----------------FLDPFSPAVWLFMLLAYLAVS 582

  Fly   349 GVLLWITFYMECKRMQKRWRLDYLP---------------SLLSTFLISFGAACIQSSSLIPRSA 398
            .||     ::..:.....|   |.|               :|.::.....|....|.|.::||:.
Mouse   583 CVL-----FLAARLSPYEW---YNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRAL 639

  Fly   399 GGRLIYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAE------SSLTVGLEPLPFTK 457
            ..|.:....:..:.|:.:.||:.:.:.|....::..:::...||:      .::..|.....|..
Mouse   640 STRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQN 704

  Fly   458 S-YLNYSRLPEIHLFIKRKIESQTQNPELWLPA-EQGVLRVRDNPGYVYVFETSSGYAYVERYFT 520
            | |..|.|:...         .|::.|.:::.: |:|:.||. |..|.::.|::.. .|..|.  
Mouse   705 SRYQTYQRMWNY---------MQSKQPSVFVKSTEEGIARVL-NSRYAFLLESTMN-EYHRRL-- 756

  Fly   521 AQEICDLNEV-----------------LFRPE-QLFYTHLHRNSTYKELFRLRFLRILETGVYRK 567
               .|:|.::                 .||.| .|....|..|:      ||..|:         
Mouse   757 ---NCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENN------RLEILK--------- 803

  Fly   568 QRSYWVHMKLHCVAQNFVITVGMEYVAPLLLMLICADILVVVILLVELAW 617
             |.:|...:......:....:|||.:..:.::|||..|:.|.:.::|..|
Mouse   804 -RKWWEGGRCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFIW 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Periplasmic_Binding_Protein_Type_2 455..572 CDD:473866 28/136 (21%)
Grik5XP_030098003.1 PBP1_iGluR_Kainate_KA1_2 23..424 CDD:380616 20/139 (14%)
Periplasmic_Binding_Protein_Type_2 437..808 CDD:473866 86/436 (20%)

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