DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and Grid2

DIOPT Version :10

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_032193.1 Gene:Grid2 / 14804 MGIID:95813 Length:1007 Species:Mus musculus


Alignment Length:698 Identity:128/698 - (18%)
Similarity:265/698 - (37%) Gaps:199/698 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LDNLVQSRIGFIVLF------------HCWQSDESLKFAQQFMKPIHPILVYHQFVQMRGVLNWS 63
            :..||:..||.:.:.            .|::.:.  :.:.....|..|      |.|        
Mouse   270 VQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNH--RISSSLCDPKDP------FAQ-------- 318

  Fly    64 HLELSYMGHTQPTLAIYVDIKCDQTQDLLEEASREQIYNQHYH--------------WLLVGNQS 114
            ::|:|       .|.||      .|..||..|..:::.::.:|              |  .|.:|
Mouse   319 NMEIS-------NLYIY------DTVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPW--QGGRS 368

  Fly   115 KLEFYDLFGLFNISIDADVSYVKEQIQDNNDSVAYAVHDVYNNGKIIGGQLNVTGSHEMSC-DPF 178
            .||.....|:..::.|.:...     ...|.:|.:.:... |.|:.:|     .|..::.| :|.
Mouse   369 MLETIKKGGVNGLTGDLEFGE-----NGGNPNVHFEILGT-NYGEELG-----RGVRKLGCWNPV 422

  Fly   179 VCRRTRHLSSLQKRSKYGNREQLTDVVLRVATVVTQRPLTLSDDELI----RFLSQENDTHIDSL 239
                |....||..:....|   :..|||||.||: :.|..:..:.::    ::.....|. :|:|
Mouse   423 ----TGLNGSLTDKKLENN---MRGVVLRVVTVL-EEPFVMVSENVLGKPKKYQGFSIDV-LDAL 478

  Fly   240 ARF-GFHLTLILRDLLHCKMKFIFSD----------SWSKSDVVGGSVGAVVDQTAD-----LTA 288
            :.: ||:..:           ::..|          :|:      |.||.:|.:.||     ||.
Mouse   479 SNYLGFNYEI-----------YVAPDHKYGSPQEDGTWN------GLVGELVFKRADIGISALTI 526

  Fly   289 TPSLATEGRLKYLSAIIETGFFRSVCIFRTPHNAGLRGDVF--LQPFSPLVWYLFGGVLSLIGVL 351
            ||.  .|..:.:.:..::  :...|.:.|.....    |:|  |.||...:|....|.:.|:|:|
Mouse   527 TPD--RENVVDFTTRYMD--YSVGVLLRRAEKTV----DMFACLAPFDLSLWACIAGTVLLVGLL 583

  Fly   352 LWITFYMECKRMQKRWRLDYLPSLLSTFLIS-----FGAACIQSSSLIPRSAGGRLIYFALFLIS 411
            :::..::...|:|       :.|:.||.|.:     :|:...|...:...:...|::..|.:|.:
Mouse   584 VYLLNWLNPPRLQ-------MGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFA 641

  Fly   412 FIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAESSLTVGLEPLPF----TKSYLNYSRLPEIHLFI 472
            .|:.:.||:.:.:.|..:.::|.|::::.|::.:      .:|:    ..:...:.|:..::.|.
Mouse   642 LIVISSYTANLAAFLTITRIESSIQSLQDLSKQT------DIPYGTVLDSAVYQHVRMKGLNPFE 700

  Fly   473 KRKIESQTQNPELW-------------LPAEQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQEI 524
            :..:.||     :|             |.::.|:.:|:.. .|.:|::.:           ..|.
Mouse   701 RDSMYSQ-----MWRMINRSNGSENNVLESQAGIQKVKYG-NYAFVWDAA-----------VLEY 748

  Fly   525 CDLNEVLFRPEQLFYT------------HLHRNSTYKELFRLRFLRILETGVYRKQRSYWVHMKL 577
            ..:|:    |:..|||            .|...|.|:::|..|.|.:.::|.....:..|.....
Mouse   749 VAIND----PDCSFYTVGNTVADRGYGIALQHGSPYRDVFSQRILELQQSGDMDILKHKWWPKNG 809

  Fly   578 HCVAQNFVI------TVGMEYVAPLLLMLICADILVVVILLVELAWKR 619
            .|...:.|.      .:.::.:|.:..:|....:|..:|.::|..|.|
Mouse   810 QCDLYSSVDAKQKGGALDIKSLAGVFCILAAGIVLSCLIAVLETWWSR 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Periplasmic_Binding_Protein_Type_2 455..572 CDD:473866 23/145 (16%)
Grid2NP_032193.1 Interaction with CBLN1 homotrimer. /evidence=ECO:0000250|UniProtKB:O43424 24..345 18/103 (17%)
Periplasmic_Binding_Protein_type1 28..429 CDD:471960 35/204 (17%)
PBP2_iGluR_delta_2 440..806 CDD:270449 81/426 (19%)
Interaction with AP4M1. /evidence=ECO:0000250|UniProtKB:Q63226 921..991
PDZ-binding 1005..1007
Blue background indicates that the domain is not in the aligned region.

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