DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and Grid2

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_032193.1 Gene:Grid2 / 14804 MGIID:95813 Length:1007 Species:Mus musculus


Alignment Length:698 Identity:128/698 - (18%)
Similarity:265/698 - (37%) Gaps:199/698 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LDNLVQSRIGFIVLF------------HCWQSDESLKFAQQFMKPIHPILVYHQFVQMRGVLNWS 63
            :..||:..||.:.:.            .|::.:.  :.:.....|..|      |.|        
Mouse   270 VQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNH--RISSSLCDPKDP------FAQ-------- 318

  Fly    64 HLELSYMGHTQPTLAIYVDIKCDQTQDLLEEASREQIYNQHYH--------------WLLVGNQS 114
            ::|:|       .|.||      .|..||..|..:::.::.:|              |  .|.:|
Mouse   319 NMEIS-------NLYIY------DTVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPW--QGGRS 368

  Fly   115 KLEFYDLFGLFNISIDADVSYVKEQIQDNNDSVAYAVHDVYNNGKIIGGQLNVTGSHEMSC-DPF 178
            .||.....|:..::.|.:...     ...|.:|.:.:... |.|:.:|     .|..::.| :|.
Mouse   369 MLETIKKGGVNGLTGDLEFGE-----NGGNPNVHFEILGT-NYGEELG-----RGVRKLGCWNPV 422

  Fly   179 VCRRTRHLSSLQKRSKYGNREQLTDVVLRVATVVTQRPLTLSDDELI----RFLSQENDTHIDSL 239
                |....||..:....|   :..|||||.||: :.|..:..:.::    ::.....|. :|:|
Mouse   423 ----TGLNGSLTDKKLENN---MRGVVLRVVTVL-EEPFVMVSENVLGKPKKYQGFSIDV-LDAL 478

  Fly   240 ARF-GFHLTLILRDLLHCKMKFIFSD----------SWSKSDVVGGSVGAVVDQTAD-----LTA 288
            :.: ||:..:           ::..|          :|:      |.||.:|.:.||     ||.
Mouse   479 SNYLGFNYEI-----------YVAPDHKYGSPQEDGTWN------GLVGELVFKRADIGISALTI 526

  Fly   289 TPSLATEGRLKYLSAIIETGFFRSVCIFRTPHNAGLRGDVF--LQPFSPLVWYLFGGVLSLIGVL 351
            ||.  .|..:.:.:..::  :...|.:.|.....    |:|  |.||...:|....|.:.|:|:|
Mouse   527 TPD--RENVVDFTTRYMD--YSVGVLLRRAEKTV----DMFACLAPFDLSLWACIAGTVLLVGLL 583

  Fly   352 LWITFYMECKRMQKRWRLDYLPSLLSTFLIS-----FGAACIQSSSLIPRSAGGRLIYFALFLIS 411
            :::..::...|:|       :.|:.||.|.:     :|:...|...:...:...|::..|.:|.:
Mouse   584 VYLLNWLNPPRLQ-------MGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFA 641

  Fly   412 FIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAESSLTVGLEPLPF----TKSYLNYSRLPEIHLFI 472
            .|:.:.||:.:.:.|..:.::|.|::::.|::.:      .:|:    ..:...:.|:..::.|.
Mouse   642 LIVISSYTANLAAFLTITRIESSIQSLQDLSKQT------DIPYGTVLDSAVYQHVRMKGLNPFE 700

  Fly   473 KRKIESQTQNPELW-------------LPAEQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQEI 524
            :..:.||     :|             |.::.|:.:|:.. .|.:|::.:           ..|.
Mouse   701 RDSMYSQ-----MWRMINRSNGSENNVLESQAGIQKVKYG-NYAFVWDAA-----------VLEY 748

  Fly   525 CDLNEVLFRPEQLFYT------------HLHRNSTYKELFRLRFLRILETGVYRKQRSYWVHMKL 577
            ..:|:    |:..|||            .|...|.|:::|..|.|.:.::|.....:..|.....
Mouse   749 VAIND----PDCSFYTVGNTVADRGYGIALQHGSPYRDVFSQRILELQQSGDMDILKHKWWPKNG 809

  Fly   578 HCVAQNFVI------TVGMEYVAPLLLMLICADILVVVILLVELAWKR 619
            .|...:.|.      .:.::.:|.:..:|....:|..:|.::|..|.|
Mouse   810 QCDLYSSVDAKQKGGALDIKSLAGVFCILAAGIVLSCLIAVLETWWSR 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 52/305 (17%)
Grid2NP_032193.1 Interaction with CBLN1 homotrimer. /evidence=ECO:0000250|UniProtKB:O43424 24..345 18/103 (17%)
Periplasmic_Binding_Protein_type1 28..429 CDD:385651 35/204 (17%)
PBP2_iGluR_delta_2 440..806 CDD:270449 81/426 (19%)
Interaction with AP4M1. /evidence=ECO:0000250|UniProtKB:Q63226 921..991
PDZ-binding 1005..1007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846338
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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