DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and Grid1

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_032192.2 Gene:Grid1 / 14803 MGIID:95812 Length:1009 Species:Mus musculus


Alignment Length:789 Identity:151/789 - (19%)
Similarity:282/789 - (35%) Gaps:255/789 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VQLANFVLDNLVQSRIGFIVLFHCWQSDESLKFAQQFMKPIHPI-----------LVYHQFVQMR 57
            |:|.:.:|..:.:.|....|:|  :.|:..::..|.|:.....:           .:.|.|..: 
Mouse   147 VRLNDVMLRLVTELRWQKFVMF--YDSEYDIRGLQSFLDQASRLGLDVSLQKVDKNISHVFTSL- 208

  Fly    58 GVLNWSHLELSYMGHTQPTLAIYVDIKCDQ-TQDLLEEASREQIYNQHYHWLLVGNQ-SKLEFYD 120
                ::.::...:...:.||...:.:...| ....:.||....:.::..||:.|..: |..|..|
Mouse   209 ----FTTMKTEELNRYRDTLRRAILLLSPQGAHSFINEAVETNLASKDSHWVFVNEEISDPEILD 269

  Fly   121 L----------------------------FGLFNISIDADVSYVKEQIQDNN----DSV---AYA 150
            |                            ..:.::..|....|: :.:|.:|    |||   |.|
Mouse   270 LVHSALGRMTVVRQIFPSAKDNQKCMRNNHRISSLLCDPQEGYL-QMLQISNLYLYDSVLMLANA 333

  Fly   151 VH-------------------------------DVYNNGKIIGGQLNVTGSHEM---SCDPFV-- 179
            .|                               |....|.|.|    :||..|.   |.:|:|  
Mouse   334 FHRKLEDRKWHSMASLNCIRKSTKPWNGGRSMLDTIKKGHITG----LTGVMEFREDSSNPYVQF 394

  Fly   180 -----------CRRTRHLS----------SLQKRSKYGNREQLTDVVLRVATVVTQRPLTLSDDE 223
                       .:..|.|:          |||:| ..|:|  |..:.|:|.||: :.|..:..:.
Mouse   395 EILGTTYSETFGKDMRKLATWDSEKGLNGSLQER-PMGSR--LQGLTLKVVTVL-EEPFVMVAEN 455

  Fly   224 LI----RFLSQENDTHIDSLAR-FGFHLTLI------LRDLLHCKMKFIFSDSWSKSDVVGGSVG 277
            ::    |:.....|. :|:||: .||...:.      ....||       :.||:      |.:|
Mouse   456 ILGQPKRYKGFSIDV-LDALAKALGFKYEIYQAPDGRYGHQLH-------NTSWN------GMIG 506

  Fly   278 AVVDQTADLTATPSLATEGRLKYLSAIIETGFFRSVCIFR---TPHNAGL-------RGDVF--L 330
            .::.:.|||.             :|||..|....||..|.   ..::.|:       :..:|  .
Mouse   507 ELISKRADLA-------------ISAITITPERESVVDFSKRYMDYSVGILIKKPEEKISIFSLF 558

  Fly   331 QPFSPLVWYLFGGVLSLIGVLLWITFYMECKRMQK--RWRLDYLPSLLSTFLISFGAACIQSSSL 393
            .||...||......:.::|||:::...::..|.|.  :.|.....:|.|...|.:||...|....
Mouse   559 APFDFAVWACIAAAIPVVGVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVYGAFVQQGGES 623

  Fly   394 IPRSAGGRLIYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLAESSLTVGLEPLPFTKS 458
            ...|...|::..:.:|.:.|:.:.||:.:.:.|..|.:.:.|:|.:.|::.     ||       
Mouse   624 SVNSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQ-----LE------- 676

  Fly   459 YLNYSRLPE--IHLFIKRK----IESQTQNPELWL--------------PAEQGVLRVRDNPGYV 503
             ::|..:.:  ::.:.:.|    :|..:...|||.              |:| |:.:.:.. .|.
Mouse   677 -MSYGTVRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSNPSE-GIRKAKKG-NYA 738

  Fly   504 YVFETSSGYAYVERYFTAQEICDL----NEVLFRPEQLFYTHLHRNSTYKELFRLRFLRILETG- 563
            ::::.    |.||......:.|.:    |.:..:...:...|   .|.|::||..|.|.:.:|| 
Mouse   739 FLWDV----AVVEYAALTDDDCSVTVIGNSISSKGYGIALQH---GSPYRDLFSQRILELQDTGD 796

  Fly   564 -VYRKQRSYWVH------------------MKLHCVAQNF-VITVGMEYVAPLLLMLICADILVV 608
             ...||: :|.|                  :|||..|..| ::.:|        |:|.|      
Mouse   797 LDVLKQK-WWPHTGRCDLTSHSSTQTEGKSLKLHSFAGVFCILAIG--------LLLAC------ 846

  Fly   609 VILLVELAW 617
            ::..:||.|
Mouse   847 LVAALELWW 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 63/312 (20%)
Grid1NP_032192.2 Interaction with CBLN1. /evidence=ECO:0000269|PubMed:27418511 21..436 52/303 (17%)
PBP1_iGluR_delta_1 25..423 CDD:107387 45/287 (16%)
PBP2_iGluR_delta_1 436..806 CDD:270448 85/420 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..960
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846288
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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