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Protein Alignment Ir75a and Gria1

DIOPT Version :9

Sequence 1:	NP_649012.2	Gene:	Ir75a / 39982	FlyBaseID:	FBgn0036757	Length:	629	Species:	Drosophila melanogaster
Sequence 2:	NP_001106796.1	Gene:	Gria1 / 14799	MGIID:	95808	Length:	907	Species:	Mus musculus

Alignment Length:	472	Identity:	98/472 - (20%)
Similarity:	186/472 - (39%)	Gaps:	82/472 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly   187 SSLQKRSKYGNREQLTDVVLRVATVVTQRPLTLSDDELIRFLSQENDTH----IDSLARFGFHLT 247
            ||:|.|:             .:.|.:.:.|..:......:|  :.||.:    ::..|....|:.
Mouse   402 SSVQNRT-------------YIVTTILEDPYVMLKKNANQF--EGNDRYEGYCVELAAEIAKHVG 451

  Fly   248 LILRDLLHCKMKFIFSD----SWSKSDVVGGSVGAVVDQTADLTATP---SLATEGRLKYLSAII 305
            ...|..:....|:...|    :|:      |.||.:|...||:...|   :|..|..:.:....:
Mouse   452 YSYRLEIVSDGKYGARDPDTKAWN------GMVGELVYGRADVAVAPLTITLVREEVIDFSKPFM 510

  Fly   306 ETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIGVLLWITFYMECKRMQKRWRLD 370
            ..|.  |:.| :.|..:......||.|.:..:|...  |.:.|||.  :..::..:.....|..:
Mouse   511 SLGI--SIMI-KKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS--VVLFLVSRFSPYEWHSE 568

  Fly   371 YLP--------------SLLSTFLISFGAACIQSSSLIPRSAGGRLI-----YFALFLISFIMYN 416
            ...              .:.::...|.||...|...:.|||..||::     :|.|.:||....|
Mouse   569 EFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTAN 633

  Fly   417 YYTSVVVSSLLSSPVKS--KIKTMRQLAESSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKIESQ 479
            ....:.|..:: ||::|  .:....::|..:|..|     .||.:...|:   |.:|.|.....:
Mouse   634 LAAFLTVERMV-SPIESAEDLAKQTEIAYGTLEAG-----STKEFFRRSK---IAVFEKMWTYMK 689

  Fly   480 TQNPELWL-PAEQGVLRVRDNPG-YVYVFETSSGYAYVERYFTAQEICDLNEVLFRPEQLFY-TH 541
            :..|.::: ..|:|::|||.:.| |.|:.|::     :..|...::.||..:|....:...| ..
Mouse   690 SAEPSVFVRTTEEGMIRVRKSKGKYAYLLEST-----MNEYIEQRKPCDTMKVGGNLDSKGYGIA 749

  Fly   542 LHRNSTYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQNF-----VITVGMEYVAPLLLMLI 601
            ..:.|..:....|..|::.|.||..|.:|.|.:.|..|.:::.     ...:.:..||.:..:||
Mouse   750 TPKGSALRGPVNLAVLKLSEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILI 814

  Fly   602 CADILVVVILLVELAWK 618
            ....|.:::.|:|..:|
Mouse   815 GGLGLAMLVALIEFCYK 831

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.