DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and GRIN3B

DIOPT Version :9

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_619635.1 Gene:GRIN3B / 116444 HGNCID:16768 Length:1043 Species:Homo sapiens


Alignment Length:463 Identity:88/463 - (19%)
Similarity:148/463 - (31%) Gaps:183/463 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 IDSLAR------FGFHLTLI-------LRDLLHCKMKFIFSDSWSKSDVVGGSVGAVVDQTADLT 287
            ||.|.|      |.|.|.|:       |||           ..|:      |.||.::...|.:.
Human   481 IDLLERLAEDTPFDFELYLVGDGKYGALRD-----------GRWT------GLVGDLLAGRAHMA 528

  Fly   288 ATPSLATEGRLKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFS----PLVWYLFGGVLSLI 348
            .|.......|    |.:::   |.|. .|.|.....:|......|..    ||.|..:.||.:.:
Human   529 VTSFSINSAR----SQVVD---FTSP-FFSTSLGIMVRARDTASPIGAFMWPLHWSTWLGVFAAL 585

  Fly   349 GV-LLWITFYMECKRMQKRWR---------------LDYLPSLLSTFLISFGAACIQSSSLIPRS 397
            .: .|::|.|        .||               ..|..:|...:.|.|....   ||..|:.
Human   586 HLTALFLTVY--------EWRSPYGLTPRGRNRSTVFSYSSALNLCYAILFRRTV---SSKTPKC 639

  Fly   398 AGGRLIYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQLA-------------------- 442
            ..|||:.....:...::.:.||:.:.:.::..      ||..:|:                    
Human   640 PTGRLLMNLWAIFCLLVLSSYTANLAAVMVGD------KTFEELSGIHDPKLHHPAQGFRFGTVW 698

  Fly   443 ESSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRK--------IESQTQNP---------------E 484
            |||          .::|:..| .|::|..::|.        :...|.:|               |
Human   699 ESS----------AEAYIKKS-FPDMHAHMRRHSAPTTPRGVAMLTSDPPKLNAFIMDKSLLDYE 752

  Fly   485 LWLPAEQGVLRVRDNPGYVYVFE------------TSSGYAYVERYFTAQEICDLNEVLFR---- 533
            :.:.|:..:|.|    |..:..|            ||:...::.||.::..|..|::..::    
Human   753 VSIDADCKLLTV----GKPFAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPC 813

  Fly   534 PEQLF-YTHLHRNSTY-----------------------KELFRLRFLRILETGVYRK--QRSYW 572
            .:::| .|...:.|.|                       ...|||...||      ||  :..||
Human   814 GKRVFAVTETLQMSIYHFAGLFVLLCLGLGSALLSSLGEHAFFRLALPRI------RKGSRLQYW 872

  Fly   573 VH--MKLH 578
            :|  .|:|
Human   873 LHTSQKIH 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 61/345 (18%)
GRIN3BNP_619635.1 PBP1_iGluR_NMDA_NR3 19..405 CDD:107372
PBP2_iGluR_NMDA_Nr3 415..808 CDD:270438 72/383 (19%)
Lig_chan 576..842 CDD:278489 48/297 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155920
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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