DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir75a and grin2b

DIOPT Version :10

Sequence 1:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017948700.2 Gene:grin2b / 100490580 XenbaseID:XB-GENE-949327 Length:1449 Species:Xenopus tropicalis


Alignment Length:669 Identity:118/669 - (17%)
Similarity:221/669 - (33%) Gaps:212/669 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 CWQSDESLKFAQQFMKPIHPILVYHQFVQMRGVLNWSHLELSYMGHTQPTLAIYVDIKCDQTQDL 91
            |:...||..:....:|.      |...|...| .|.|..|..|..|  |.|.|.           
 Frog   316 CYNIQESRVYEAHMLKR------YLINVTFEG-RNLSFSEDGYQMH--PKLVII----------- 360

  Fly    92 LEEASREQIYNQHYHWLLVGNQS----KLEFY--DLFGLFNISIDADVSYVKEQIQDNNDSVA-- 148
                    :.||...|..||...    |:::|  .:|.|:..|         |:.:|.:.|:.  
 Frog   361 --------LLNQQRKWERVGKYKDRSLKMKYYVWPVFELYPNS---------EEHKDEHLSIVTL 408

  Fly   149 -----YAVHDVYNNGKIIGGQLNVTGSHEMSCDPFVCRRTRHLSSLQKRSKYGNREQ-------- 200
                 ..|.||                     ||......|:....:|:.:..||.:        
 Frog   409 EEAPFVIVEDV---------------------DPLSGTCMRNTVPCRKQIRTENRTEEGGNYIKR 452

  Fly   201 -----LTDVVLRVATVVTQRPLTLSDDELIRFLSQENDTHIDSLARFGFHLTLILRDLLHCKMKF 260
                 ..|::.::|..|                            :|.:.|.|:... .|.|.  
 Frog   453 CCKGFCIDILKKIAKTV----------------------------KFTYDLYLVTNG-KHGKK-- 486

  Fly   261 IFSDSWSKSDVVGGSVGAVVDQTADLTATPSLATEGR---LKYLSAIIETGFFRSVCIFRTPHNA 322
             .:.:|:      |.:|.||.:.|.:........|.|   :.:....||||.  ||.:.|:  |.
 Frog   487 -INGTWN------GMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGI--SVMVSRS--NG 540

  Fly   323 GLRGDVFLQPFSPLVWYLFGGVLSLIGVLLWITF-------YMEC---------------KRMQK 365
            .:....||:|||..||.:...:|.::..:....|       |..|               |.:..
 Frog   541 TVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWL 605

  Fly   366 RWRLDYLPSLLSTFLISFGAACIQSSSLIPRSAGGRLI--YFALFLISFIMYNYYTSVVVSSLLS 428
            .|.|.:..|:           .:|:    |:....:::  .:|.|.:.|:.  .||:.:.:.::.
 Frog   606 LWGLVFNNSV-----------PVQN----PKGTTSKIMVSVWAFFAVIFLA--SYTANLAAFMIQ 653

  Fly   429 SPVKSKIKTMRQLA-------ESSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKIESQTQNPELW 486
            .....::..:....       ..:...|..|...|:..:..:.| |:|.::.:..:...|:    
 Frog   654 EEYVDQVSGLSDKKFQRPNDFSPAFRFGTVPNGSTERNIRNNYL-EMHSYMVKFNQRSVQD---- 713

  Fly   487 LPAEQGVLRVRDNPGYVYVFETSSGYAYVERYFTAQ-EICDLNEVLFRPEQLFYT-----HLHRN 545
                 .:|.::......::::     |.|..|...: |.|.|  |.....::|.|     .:.::
 Frog   714 -----ALLSLKTGKLDAFIYD-----AAVLNYMAGRDEGCKL--VTIGSGKVFATTGYGIAIQKD 766

  Fly   546 STYKELFRLRFLRILETGVYRKQRSYWVHMKLHCVAQNFVIT--VGMEYVAPLLLMLICADILVV 608
            |.:|....|..|::...|...:..:.|:....| ..:|.|::  :.::.:|.:..||..|..|.:
 Frog   767 SGWKRQVDLAILQLFGDGEMEELEALWLTGICH-NEKNEVMSSQLDIDNMAGVFYMLAAAMALSL 830

  Fly   609 VILLVELAWKRFFTRHLTF 627
            :..::|         ||.|
 Frog   831 ITFIME---------HLFF 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir75aNP_649012.2 Periplasmic_Binding_Protein_Type_2 455..572 CDD:473866 20/122 (16%)
grin2bXP_017948700.2 PBP1_iGluR_NMDA_NR2 28..383 CDD:380601 21/94 (22%)
PBP2_iGluR_NMDA_Nr2 400..800 CDD:270436 81/497 (16%)
NMDAR2_C 837..1449 CDD:463148 3/4 (75%)

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