Protein Alignment Cln3 and YHC3

DIOPT Version :10

• Sequence 1: NP_649011.1
• Gene: Cln3 / 39981
• FlyBaseID: FBgn0036756
• Length: 422
• Species: Drosophila melanogaster
• Sequence 2: NP_012476.1
• Gene: YHC3 / 853387
• SGDID: S000003595
• Length: 408
• Species: Saccharomyces cerevisiae
• Alignment Length: 406
• Identity: 136/406 - (33%)
• Similarity: 209/406 - (51%)
• Gaps: 58/406 - (14%)

  Fly    41 YWILGLCNNYGYVVMLSAAHDIIKQFNPNDESEESSSGRNCHLVSTGAILLADVLPSLFVKILMP 105
            :|:.||.||..|||:||||.||:....|.                 ..:||||:.|||.:|:..|
Yeast    12 FWLFGLINNVLYVVILSAAVDIVGPTLPK-----------------SLVLLADIFPSLAIKLCSP 59

  Fly   106 FF--PFWVNFRIALAVAFSAAGFLLVGFANAEWMALLGVIITSASSGIGETTFLAYSSRYNKNVI 168
            ||  ....::||...:..|..|..||.|.|. ::.|||:...|.|||.||.|||..:..|.:..:
Yeast    60 FFIDRIKYSYRIWSLITMSCLGMFLVSFKNL-FVCLLGISFASISSGFGEVTFLQLTHYYKQISL 123

  Fly   169 STWSSGTGGAGVIGSLSYASLRSLDFSP-RDTMLIMLIFPAIEAFAFWLLLRR----------PQ 222
            :.|||||||||:||..||..|.|:...| :.|:|:..:.|.  ||.|:..|..          .|
Yeast   124 NGWSSGTGGAGIIGGASYMFLTSIFKVPVKLTLLVFSLLPF--AFLFYFKLESNDTNLTYQSLQQ 186

  Fly   223 VD------ILP----VTTVESTEVLISDEKPLVGFKEKLFYIKHLFKYMLPLCLVYFFEYFINQG 277
            :|      ::|    .|...:::.|.|..:.::...::|..:  :|.||:||..||.|||.|||.
Yeast   187 IDEAEDDQLVPFPVAFTHTNASQSLYSTRQHILQTVKRLRRL--VFPYMVPLTTVYLFEYLINQA 249

  Fly   278 LFELVYFEDIFLDKDS--------QYRWLNVD----YQIGVFISRSSVNLFQLDKIWLMSIFQFV 330
            :...:.| .|..|:.|        :||.:.|.    ||:|||||||..:|.::..:::::..|.|
Yeast   250 VAPTLLF-PINGDERSKSMPFFFHKYRDIYVTYGTLYQLGVFISRSFGHLMRMRSLYILAFLQGV 313

  Fly   331 NVVYFLTEVIWWYTPSIWIVFAIVLWEGLLGGGAYVNTFYRMSKEISPERQQFAMAMVVQSDSYG 395
            |:...:.:..::.|.|.|.|..::.:||.|||.:|||||..:.::..|:..:|||..|..:||:|
Yeast   314 NLCITVLQSWFYVTHSPWAVMILIFYEGFLGGASYVNTFLNILEQEDPDETEFAMGAVSIADSFG 378

  Fly   396 IALAGFLAIPVHNAIC 411
            :.||..|.:.:...:|
Yeast   379 VFLAALLGLGLEPKLC 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cln3	NP_649011.1	CLN3	39..413	CDD:460570	136/406 (33%)
YHC3	NP_012476.1	CLN3	11..396	CDD:460570	136/406 (33%)