DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32187 and Sgsh

DIOPT Version :9

Sequence 1:NP_730303.1 Gene:CG32187 / 39980 FlyBaseID:FBgn0052187 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_061292.2 Gene:Sgsh / 27029 MGIID:1350341 Length:502 Species:Mus musculus


Alignment Length:116 Identity:26/116 - (22%)
Similarity:45/116 - (38%) Gaps:38/116 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 EMLRPAFELAEQVLDT------LARRFNTLYALE------------ARDLNEVRLIVESICAMHN 355
            :::.|.|     |.||      ||.::.|:..::            |..||:..:|..|      
Mouse   219 DVMVPYF-----VPDTPAARADLAAQYTTIGRMDQGVGLVLQELRGAGVLNDTLIIFTS------ 272

  Fly   356 ICEEYEDDGLEDP-GHRSFSWGGVAEGVRGSEKDSKGLQRRVELLDELVAI 405
                  |:|:..| |..:..|.|.||.:..|..:..  ||..::.|..|::
Mouse   273 ------DNGIPFPSGRTNLYWPGTAEPLLVSSPEHP--QRWGQVSDAYVSL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32187NP_730303.1 None
SgshNP_061292.2 AslA 20..464 CDD:225661 26/116 (22%)
SGSH 24..472 CDD:293751 26/116 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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