DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5589 and ROK1

DIOPT Version :9

Sequence 1:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_011344.1 Gene:ROK1 / 852704 SGDID:S000003139 Length:564 Species:Saccharomyces cerevisiae


Alignment Length:619 Identity:225/619 - (36%)
Similarity:343/619 - (55%) Gaps:93/619 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DIFKLITAGVRFTKKS------------------KKEPSSKQQLQPLPEVSKHEEPVKSEESDKD 51
            |||:::|.|....|:|                  .||.:::.|:....:..:::..:...|.|::
Yeast     2 DIFRVLTRGASVKKESGPKAKAADYSVINGNDENHKEDNNESQIVKELDFFRNKRIISKVEDDRE 66

  Fly    52 DEDITEFRLLDGDSSNQPKRK-------KPKKEKTLSPKELEIQKAAEEANETRKQYGIRVLGKN 109
                   :..:.||.|:.::.       ||....|:            ||:..||.|...|.|.:
Yeast    67 -------KTTENDSPNKEEKSGNDDGLIKPVITNTV------------EASALRKSYKGNVSGID 112

  Fly   110 VPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFL 174
            :|.|:.||..|...|....||..||:...|..|||||.:.:||.|..|.::||.|||||||||||
Yeast   113 IPLPIGSFEDLISRFSFDKRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFL 177

  Fly   175 TPIINGLRAHK-TTGLRALVLAPTRELAQQIYRECAELT------RETGLRTHFISKVSEAKQKH 232
            .|::..:...| |.||:.|:::||:|||.||:.||.:|:      ::..|:...:||...||.|:
Yeast   178 IPLVQQIIDDKQTAGLKGLIISPTKELANQIFIECFKLSYKIFLEKKRPLQVALLSKSLGAKLKN 242

  Fly   233 GAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACS 297
            .....::|||::|||.|:..:::.|  .||||.|:..:.||||:|.::   .|.||.|||.:||.
Yeast   243 KVVSDKKYDIIISTPLRLIDVVKNE--ALDLSKVKHLIFDEADKLFDK---TFVEQSDDILSACR 302

  Fly   298 NPTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVR 362
            .|:...|.||||....|.:.|...:.:.||:.||.:.:|...::|:|:|.|:|.|||:|||.||:
Yeast   303 EPSLRKAMFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQ 367

  Fly   363 QG-LQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELM 426
            :| .:||:::|::|..|||.|:.||:||.||||||||||:..|||..::.|:.|.:|.||||:::
Yeast   368 EGEFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDVL 432

  Fly   427 GRGIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALIIKNSGGT 491
            .|||||||||||||||.|.::.:|:||||||||.||.|:||||:|::|:..::.|..::|.||..
Yeast   433 ARGIDFKGVNLVINYDVPGSSQAYVHRIGRTGRGGRSGKAITFYTKQDSVAIKPIINVMKQSGCE 497

  Fly   492 VPEYMLQMKKVRKSEAKMRAKKPLDREDISTKIRPETKGDEKHKSTK-LKKVERTEKILKNRKGY 555
            |.|:|.:|.|:.:.|          :|.|        |..:.||..| :..|.:.:|..:.|   
Yeast   498 VSEWMDKMAKMTRKE----------KESI--------KNGKAHKERKQITTVPKMDKAKRRR--- 541

  Fly   556 EKDLNSKQKKLGNIKTELKPAGKRKGNVEKKTKN 589
                          :.|:..|.||:.|.|...|:
Yeast   542 --------------QQEMIAASKRRKNEELSKKH 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5589NP_649009.1 SrmB 87..594 CDD:223587 207/512 (40%)
P-loop_NTPase 123..329 CDD:304359 86/212 (41%)
HELICc 349..469 CDD:238034 72/120 (60%)
ROK1NP_011344.1 SrmB 101..560 CDD:223587 204/498 (41%)
DEADc_DDX52 133..336 CDD:350715 84/207 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344436
Domainoid 1 1.000 140 1.000 Domainoid score I1032
eggNOG 1 0.900 - - E1_KOG0344
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5093
Inparanoid 1 1.050 366 1.000 Inparanoid score I368
Isobase 1 0.950 - 0 Normalized mean entropy S1012
OMA 1 1.010 - - QHG56500
OrthoFinder 1 1.000 - - FOG0003197
OrthoInspector 1 1.000 - - oto99479
orthoMCL 1 0.900 - - OOG6_102417
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1170
SonicParanoid 1 1.000 - - X3665
TreeFam 1 0.960 - -
1615.740

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