DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5589 and AT3G09720

DIOPT Version :9

Sequence 1:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001326599.1 Gene:AT3G09720 / 820129 AraportID:AT3G09720 Length:541 Species:Arabidopsis thaliana


Alignment Length:566 Identity:217/566 - (38%)
Similarity:322/566 - (56%) Gaps:63/566 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDEHDIFKLITAGVRFTKKSKKEPSSKQQLQPLPEVSKHEEPVKSEESDK------DDEDITE-- 57
            |::...|  :..|..|.||           :..|:.:|.:...:.::|:|      ::|:.||  
plant     1 MEKSSYF--LFGGTNFNKK-----------KFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQP 52

  Fly    58 ---------------------FRLLDGDSSNQPKRKKPKKEKTLSPKEL------EIQKAAEEAN 95
                                 ....|...|::..|.|.|.|:.::..|:      |:.:..|...
plant    53 EAEKVIVSSKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDA 117

  Fly    96 ETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALM 160
            .:||||.|.|.|.|:|||:.||..|:..:.....:.:||....|..|||||.||:|:||..|...
plant   118 LSRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECF 182

  Fly   161 ACAPTGSGKTLAFLTPIINGLRAHKTTGLRALVLAPTRELAQQIYRECAELTRETGLRTHFISKV 225
            ||||||||||.||:.|::..|:...|.|:||::|:|.||||.|..||..:|.:.:......::| 
plant   183 ACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTK- 246

  Fly   226 SEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLD 290
              ...|.....|...|:|:|||.|::..::.:.  :|||.||:.||||:|:|.|:   :..:|:|
plant   247 --PLVKTADFSKLWCDVLISTPMRLKRAIKAKK--IDLSKVEYLVLDESDKLFEQ---SLLKQID 304

  Fly   291 DIYAACSNPTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLV 355
            .:..|||||:...:.||||....|.:.|...:.:.||:.||.:|:|:|||:|:|:|.|||.|||:
plant   305 CVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLL 369

  Fly   356 AIRDLVRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVL 420
            |:|....:.|.||||:|||||||||:|::||..:.|...|||::....:|:|.|..||.|..|||
plant   370 ALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVL 434

  Fly   421 ICTELMGRGIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALII 485
            |.|:::.||:||||:|.|||||||.:..:|||||||:|||||.|.||||:|::|...||.||..:
plant   435 IATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTM 499

  Fly   486 KNSGGTVPEYMLQMKKVRKSEAKMRAKKPLDREDISTKIRPETKGD 531
            .:||..||.:::.:||     .|.|..:| .|:.||||.:.: |.|
plant   500 MSSGCEVPSWIMSLKK-----KKWRKHRP-RRDSISTKPKAD-KND 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5589NP_649009.1 SrmB 87..594 CDD:223587 196/445 (44%)
P-loop_NTPase 123..329 CDD:304359 78/205 (38%)
HELICc 349..469 CDD:238034 68/119 (57%)
AT3G09720NP_001326599.1 SrmB 109..537 CDD:223587 194/442 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 128 1.000 Domainoid score I1741
eggNOG 1 0.900 - - E1_KOG0344
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5093
Inparanoid 1 1.050 360 1.000 Inparanoid score I589
OMA 1 1.010 - - QHG56500
OrthoDB 1 1.010 - - D400908at2759
OrthoFinder 1 1.000 - - FOG0003197
OrthoInspector 1 1.000 - - oto3672
orthoMCL 1 0.900 - - OOG6_102417
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3665
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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