DRSC/TRiP Functional Genomics Resources

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Protein Alignment ais and CG7483

DIOPT Version :10

Sequence 1:NP_649009.1 Gene:ais / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster


Alignment Length:378 Identity:118/378 - (31%)
Similarity:185/378 - (48%) Gaps:33/378 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 TRDFKMLP-----RLQQNLL----SRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTP 176
            :.|.:::|     .|::.||    :..|:.|:.||.:::..:::.|.::|.|.:|:|||..|...
  Fly    19 SEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSIS 83

  Fly   177 IINGLRAHKTTGLR---ALVLAPTRELAQQIYRECAELTRETGLRTHFI---SKVSE--AKQKHG 233
            |:..|    .|.||   .|.|:||||||.||.:....|.....::.|..   :.:.|  .|..:|
  Fly    84 ILQSL----DTTLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGEDIRKLDYG 144

  Fly   234 AECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSN 298
            ..      |:..||.||..::::.  :|....::..||||||.::.:|   ||||:.|:|.... 
  Fly   145 QH------IVSGTPGRVFDMIKRR--VLRTRAIKMLVLDEADEMLNKG---FKEQIYDVYRYLP- 197

  Fly   299 PTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQ 363
            |...|...|||....:.:...:.:.:.:||.:.......|.::|..:.|..|..|...:.||...
  Fly   198 PATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 262

  Fly   364 GLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGR 428
            ......::|..:|.:...|.|::......|..:|.:..|.:||..:|.||.|...|||.|::..|
  Fly   263 LTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWAR 327

  Fly   429 GIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGI 481
            |||.:.|:||||||.|.....|||||||:||.||.|.||.|...:|...||.|
  Fly   328 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aisNP_649009.1 SrmB 123..538 CDD:440279 118/376 (31%)
CG7483NP_649788.2 DEAD-like_helicase_N 4..399 CDD:475120 118/378 (31%)

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