DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5589 and CG9630

DIOPT Version :9

Sequence 1:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster


Alignment Length:552 Identity:157/552 - (28%)
Similarity:241/552 - (43%) Gaps:128/552 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 QNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPIINGL-RAHKTT-----GLR 190
            |.:.|..|...||:|..|:|:||.|:.:.|.|.||||||||||.|::..| |.||.|     .:.
  Fly    20 QVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETPWGPKEIG 84

  Fly   191 ALVLAPTRELAQQIYRECAELTRETGLRTHFI-------SKVSE--AKQKHGAECKQRYDILVST 246
            |||::||||||:||....|:......|. |..       :.:.|  |..:....|     |||.|
  Fly    85 ALVISPTRELARQISEVLAQFLEHEDLE-HLNQQLIVGGNSIEEDIATLRRETPC-----ILVCT 143

  Fly   247 PNRVRFLLQQEPPLLDLS----HVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCVAFFS 307
            |.|:..|.|::...|:|:    .:|:.||||||||::.|   ||..:::|........: ...||
  Fly   144 PGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLG---FKTSVNNILGYLPRQRR-TGLFS 204

  Fly   308 ATYTVPVAKWALRHLKNLVRITIGVQNSAT---------ETVQQELLFVGSEGGKLVAIRDLVRQ 363
            ||.|..|.......|:|.|.:::..:.|..         ..|:.||.||.            :.:
  Fly   205 ATQTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVEPELKFVA------------LLE 257

  Fly   364 GLQPP------VLVFVQSKERAKQLFEEL--LYDGINVDVIHAERSQHQRDNCVKAFREGSIWVL 420
            .|..|      |:||..:....:...|.|  |.....|..||. :.:::|.|.|:.||.....||
  Fly   258 FLSSPATVIGKVMVFFPTCACVEYWAEALPPLLPKRTVLGIHG-KMKNKRANVVEKFRNTPQAVL 321

  Fly   421 ICTELMGRGIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALII 485
            :||:::.||:|...:..|:.:|.|.|..|::||:|||.|.|..|.|:.|....:.:.:..:.:..
  Fly   322 LCTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPSEDAYVHFLKINQ 386

  Fly   486 KNSGGTVPEYMLQMKKVRKSEAK--MRAKKPLDRE-DISTKIRPETKG--DE------------- 532
            |          :::.|:...||:  .|.||.|... |...:::...||  |:             
  Fly   387 K----------VELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYT 441

  Fly   533 KHKST---KLKKVERTEKI-------------LKNRKG-------YEKDLNS-----------KQ 563
            ||:.:   :||.::..:..             |||.:|       :|.||:.           :|
  Fly   442 KHECSAILRLKDLDLGKMATAYGLLQLPRMPELKNYQGGGYVAPAFEVDLSKLTYKNAQKEQVRQ 506

  Fly   564 KKLGNI-KTELKPAGKR-KGNVE-----KKTK 588
            ||:... :|...|..|: |..||     ||.|
  Fly   507 KKMETYEQTGSWPGQKQHKKRVESWDQTKKAK 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5589NP_649009.1 SrmB 87..594 CDD:223587 157/552 (28%)
P-loop_NTPase 123..329 CDD:304359 78/215 (36%)
HELICc 349..469 CDD:238034 37/127 (29%)
CG9630NP_649777.1 DEADc 6..226 CDD:238167 78/215 (36%)
DEXDc 22..232 CDD:214692 77/219 (35%)
HELICc 239..370 CDD:238034 42/143 (29%)
DUF4217 411..470 CDD:290667 8/58 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451672
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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