Protein Alignment CG5589 and Rm62

DIOPT Version :9

• Sequence 1: NP_649009.1
• Gene: CG5589 / 39979
• FlyBaseID: FBgn0036754
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Alignment Length: 447
• Identity: 134/447 - (29%)
• Similarity: 222/447 - (49%)
• Gaps: 39/447 - (8%)

  Fly    63 GDSSNQPKRKKPKKEKTLSP-KELEIQKAAEEANET-------RKQYGIRVLGKNVPPPVDSFGT 119
            |.|.:.|.|  |.....|:| |:...|:....||.:       |::..|.|.|: ||.|:..|..
  Fly   224 GGSQDLPMR--PVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQ-VPNPIQDFSE 285

  Fly   120 L-TRDFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPII----N 179
            : ..|:.|     :.:..:.:..||.||.|..|:.:.....:..|.|||||||.::.|.|    |
  Fly   286 VHLPDYVM-----KEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 345

  Fly   180 GLRAHKTTGLRALVLAPTRELAQQIYRECAELTRETGLRTHFISKVSEAKQKHG--AECKQRYDI 242
            .....:..|..||||||||||||||.:...|....:.:|.   :.|.....|.|  .:.::..:|
  Fly   346 QQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRN---TCVFGGAPKGGQMRDLQRGCEI 407

  Fly   243 LVSTPNR-VRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCVAFF 306
            :::||.| :.||   .....:|....:.|||||||:::.|   |:.|:..|.:.. .|.:....:
  Fly   408 VIATPGRLIDFL---SAGSTNLKRCTYLVLDEADRMLDMG---FEPQIRKIVSQI-RPDRQTLMW 465

  Fly   307 SATYTVPVAKWALRHLKNLVRITIG-VQNSATETVQQ--ELLFVGSEGGKLVAIRDLVRQGLQPP 368
            |||:...|.:.|...|.|.::|.|| ::.||...::|  ::....|:..||..:...:....:.|
  Fly   466 SATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESP 530

  Fly   369 --VLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGID 431
              :::||::|.|...|...:...|:....||.::||.:||..::.||.|...:|:.|::..||:|
  Fly   531 GKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLD 595

  Fly   432 FKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALIIKNS 488
            ..|:..|||:|:|..:..||||||||||:...|.:..|||:.:....:.:..:::.:
  Fly   596 VDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREA 652

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5589	NP_649009.1	SrmB	87..594	CDD:223587	126/422 (30%)
		P-loop_NTPase	123..329	CDD:304359	65/212 (31%)
		HELICc	349..469	CDD:238034	41/121 (34%)
Rm62	NP_524243.2	PTZ00424	280..656	CDD:185609	116/388 (30%)
		DEADc	283..488	CDD:238167	66/219 (30%)
		HELICc	499..633	CDD:238034	42/133 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451739
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840