Protein Alignment CG5589 and abs

DIOPT Version :9

• Sequence 1: NP_649009.1
• Gene: CG5589 / 39979
• FlyBaseID: FBgn0036754
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Alignment Length: 577
• Identity: 160/577 - (27%)
• Similarity: 263/577 - (45%)
• Gaps: 92/577 - (15%)

  Fly     1 MDEHDIFKLITAGVRFTKKSKKEPSSKQQLQPLPEVSKHEEPVKSEESDKDDEDITEFRLLDG-- 63
            :|:|...|.|.       ::||..:.::||:               |.:|..|.|.:.:.|.|
  Fly    84 LDQHTELKKIA-------EAKKLSAVEKQLR---------------EEEKIMESIAQQKALMGVA 126

  Fly    64 DSSNQPKRKKPKKEKTLSPKELEIQKAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLP 128
            :.:...:.::|.|.....|:.:. :.:.||....|.:..|.|.|:...||:.||    |:.|...
  Fly   127 ELAKGIQYEQPIKTAWKPPRYIR-EMSEEEREAVRHELRILVEGETPSPPIRSF----REMKFPK 186

  Fly   129 RLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPII-------NGLRAHKT 186
            .:...|.::...:|||||:|.||.:|..|.|:..|.|||||||.|:.|:|       ..|...:.
  Fly   187 GILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERN 251

  Fly   187 TGLRALVLAPTRELAQQIYRECAELTRETGLRTHFISKVSEAKQKHGAECKQRYD-------ILV 244
            .|...|::.|:||||:|.:......::.  |:...:.::.......|....:..|       |:|
  Fly   252 EGPYGLIICPSRELAKQTHEIIQHYSKH--LQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVV 314

  Fly   245 STPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCVAFFSAT 309
            :||.|:..:|.::  :|.|....:..:|||||:::.|   |:|.:..|::......:.: .||||
  Fly   315 ATPGRLMDMLDKK--ILTLDMCRYLCMDEADRMIDMG---FEEDVRTIFSFFKGQRQTL-LFSAT 373

  Fly   310 YTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQGLQPPVLVFVQ 374
            ....:..:|...|...|.|.:|...:|:..|.|::.:|..| .|:|.:.|.: |...||||:|.:
  Fly   374 MPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQE-AKVVYLLDCL-QKTAPPVLIFAE 436

  Fly   375 SKERAKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLVI 439
            .|:....:.|.||..|:....||..:.|.:|...|.|:|.|...||:.|::..:|:||..|..||
  Fly   437 KKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVI 501

  Fly   440 NYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALIIKNSGGTVPEYMLQMKKVRK 504
            |||.|....:|:||||||||                ||.:|:|..:.|. .|....:|.:|.: .
  Fly   502 NYDMPDDIENYVHRIGRTGR----------------SNTKGLATTLINK-TTEQSVLLDLKHL-L 548

  Fly   505 SEAKMRAKKPLDREDISTKIRPETK------GDEK---------HKSTKLKKVERTE 546
            .|.|......||      ::.|||:      ||..         |:.|:..|:|..:
  Fly   549 IEGKQEVPDFLD------ELAPETEHQHLDLGDSHGCTYCGGLGHRITECPKLEAVQ 599

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5589	NP_649009.1	SrmB	87..594	CDD:223587	143/489 (29%)
		P-loop_NTPase	123..329	CDD:304359	60/219 (27%)
		HELICc	349..469	CDD:238034	45/119 (38%)
abs	NP_524220.1	DEADc	179..393	CDD:238167	62/225 (28%)
		DEXDc	192..397	CDD:214692	61/212 (29%)
		Helicase_C	414..523	CDD:278689	45/126 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451741
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840