Protein Alignment CG5589 and eIF4A

DIOPT Version :9

• Sequence 1: NP_649009.1
• Gene: CG5589 / 39979
• FlyBaseID: FBgn0036754
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_001245907.1
• Gene: eIF4A / 33835
• FlyBaseID: FBgn0001942
• Length: 403
• Species: Drosophila melanogaster
• Alignment Length: 373
• Identity: 121/373 - (32%)
• Similarity: 189/373 - (50%)
• Gaps: 24/373 - (6%)

  Fly   115 DSFGTLTRDFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPIIN 179
            |:|.    |..:...|.:.:....|:.|:.||.:|:...::.|.::|.|.:|:|||..|...|:.
  Fly    30 DNFD----DMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQ 90

  Fly   180 GLRAHKTTGLR---ALVLAPTRELAQQIYRECAELTRETGLRTHFI---SKVSEAKQKHGAECKQ 238
            .:    .|.:|   ||:||||||||.||.|....|.....:.:|..   :.|.|..:...:.|
  Fly    91 QI----DTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGC-- 149

  Fly   239 RYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCV 303
              .::|.||.||..::.::  :|...:::.|||||||.::..|   ||:|:.|::.... |...|
  Fly   150 --HVVVGTPGRVYDMINRK--VLRTQYIKLFVLDEADEMLSRG---FKDQIQDVFKMLP-PDVQV 206

  Fly   304 AFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQGLQPP 368
            ...|||....|.:.:...:::.|.|.:..:....|.::|..:.|..|..||..:.||........
  Fly   207 ILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQ 271

  Fly   369 VLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFK 433
            .::|..::.:..||.:|:......|..:|.:..|..|:..:|.||.||..|||.|:|:.||||.:
  Fly   272 SVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQ 336

  Fly   434 GVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGI 481
            .|:||||||.|....:|||||||.||.||.|.||.|.|.:|...|:.|
  Fly   337 QVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDI 384

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5589	NP_649009.1	SrmB	87..594	CDD:223587	121/373 (32%)
		P-loop_NTPase	123..329	CDD:304359	61/211 (29%)
		HELICc	349..469	CDD:238034	49/119 (41%)
eIF4A	NP_001245907.1	PTZ00424	6..403	CDD:185609	121/373 (32%)
		DEADc	32..232	CDD:238167	62/217 (29%)
		Helicase_C	254..358	CDD:278689	38/103 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451745
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24031
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940