DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5589 and Dbp80

DIOPT Version :9

Sequence 1:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster


Alignment Length:535 Identity:143/535 - (26%)
Similarity:233/535 - (43%) Gaps:106/535 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FTKKSKKEPSSKQQLQPLPEVSKHEEPVKS-EESDKDDEDITEFRLLDGDSSNQPKRKKPKKEKT 79
            :.||::.:..||.       |.|.....|| ||:|.|..|..|..||         .|...|...
  Fly     4 WAKKAEDQEVSKL-------VDKLNLDSKSGEETDFDVADPAETSLL---------IKILGKGLV 52

  Fly    80 LSPKELEIQKAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLL----SRNFD 140
            .:...|:||:                  ||...|:.|..|    |:.| .|:.:||    :..|:
  Fly    53 NTKLSLDIQQ------------------KNPNSPLHSVKT----FEAL-HLKASLLKGIYAMGFN 94

  Fly   141 HPTPIQMQALPVLL--QRRALMACAPTGSGKTLAFLTPIINGLRA---HKTTGLRALVLAPTREL 200
            .|:.||..|||.||  ..:.::|.:.:|:|||.||:..:::.:..   |.    :.|.|:||.||
  Fly    95 TPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHP----QVLCLSPTYEL 155

  Fly   201 AQQ---IYRECAELTRETGLRTHFISKVSEAKQKHGAECKQRYDILVSTPNR-----VRFLLQQE 257
            |.|   :.....:..||..||  |..:..|..:..    |....||:.||.:     ::|     
  Fly   156 AIQTGEVAARMGQFCREIKLR--FAVRGEEVDRSK----KIEEHILIGTPGKLLDWGIKF----- 209

  Fly   258 PPLLDLSHVEWFVLDEAD-RLMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWALRH 321
             .|.|:..:..||||||| .:..:|.:   :|...|:... ||...:.||||||...|..:|...
  Fly   210 -RLFDMKKISVFVLDEADVMIATQGHH---DQCIRIHKML-NPHCQMLFFSATYGKEVMDFARLI 269

  Fly   322 LKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQGLQPPVLVFVQSKERAKQLFEEL 386
            :.:...|.:..:..:.|.::|..:...:|.||..||:::.........::|..:|..|..|..::
  Fly   270 VADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQAIIFCHTKRTAAWLAAKM 334

  Fly   387 LYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLVINYDFP------P 445
            ..||.:|.|:..:.:..||.:.:..||.|...|||.|.::.||||.:.|.:|:|:|.|      .
  Fly   335 TSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMA 399

  Fly   446 TTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALI-IKNSGGTVPEYMLQMKKVRKSEAKM 509
            ...:|:||||||||.            |.::..|...:. :|...|.:.      |::.:|.:..
  Fly   400 DCETYLHRIGRTGRF------------EPSALTRNSPIFGVKAESGKIG------KEINRSSSGA 446

  Fly   510 RA---KKPLDREDIS 521
            .:   :.|.::|:||
  Fly   447 ESGSREMPKEKENIS 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5589NP_649009.1 SrmB 87..594 CDD:223587 124/463 (27%)
P-loop_NTPase 123..329 CDD:304359 64/223 (29%)
HELICc 349..469 CDD:238034 40/125 (32%)
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 64/222 (29%)
DEXDc 88..291 CDD:214692 61/222 (27%)
Helicase_C 299..414 CDD:278689 38/114 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451516
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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