DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5589 and CG8611

DIOPT Version :9

Sequence 1:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster


Alignment Length:707 Identity:179/707 - (25%)
Similarity:274/707 - (38%) Gaps:182/707 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KSKKEPSSKQQLQPLP------------------------EVSKHEEPVKS-------------- 45
            ||.|:|.:..|| |.|                        |.|..||..|:              
  Fly   169 KSNKKPKNPNQL-PTPGDLFRAQLEEERRQKRREEGGGDQEASADEEDAKNNSGGGSPRVKPSSA 232

  Fly    46 -----------------EESDKDDEDITEFRLLDGDSSNQPK---RKKPKKEKTLSPKELEIQKA 90
                             |||...||:..|..........:||   :|.||.|:|.|......:|.
  Fly   233 VKESKKSSDIEDSGESGEESATSDEEPDESSAQSPGQEKEPKQTAKKPPKAEETSSTNRFRTKKI 297

  Fly    91 A---EEANETRKQYGIRVLGKNVPPPVDSF--GTLTRDFKMLPRLQQN---LLSRNFDHPTPIQM 147
            .   :...|..||.|.|.    |.|..::.  |:......:.|...:|   |||  ....|.:|.
  Fly   298 GLFDQSDVEALKQLGQRA----VKPVKETIFTGSKISTLGLHPHAVKNLEDLLS--IRELTSVQQ 356

  Fly   148 QALPVLLQRRALMACAPTGSGKTLAFLTPIINGL-----RAHKTTGLRALVLAPTRELAQQIYRE 207
            :.:|.:||.:.::..:.||||||||:..|::..|     |..:..|:.|||:.|||||..|.|..
  Fly   357 KTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYEL 421

  Fly   208 CAELTRETGLRTHFISKVSEAKQKHGAECKQRYDILVSTPNR-VRFLLQQEPPLLDLSHVEWFVL 271
            ..:|.:.............|:::...|..::..:||:.||.| |..||....  ..|:.:::.:|
  Fly   422 IQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTAS--FKLTKLQFLIL 484

  Fly   272 DEADRLMEEGQNNFKEQL----DDIYAACSN---PTKCVAFFSATYTVPVAKWALRHLKN----- 324
            ||||||:|.|.....:||    |...|.|.:   |.......|||.|..|.:.|...|||     
  Fly   485 DEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYID 549

  Fly   325 -----------------------LVRITIGV---QNSAT------ETVQQELLFVGSEGGKLVAI 357
                                   |:.:..|:   |...|      |.:|...:.|..: .:|||:
  Fly   550 NSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPK-LRLVAL 613

  Fly   358 RDLVRQGL-----QPPVLVFVQSKERAK----QLFEEL-----------------------LYDG 390
            ..|:.:.:     |...:||:.:.|...    .|.|.|                       |..|
  Fly   614 SSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLLQG 678

  Fly   391 INVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLVINYDFPPTTISYIHRIG 455
            :....:|...:|.:|....:.||:.:..||:.|:::|||||...:.||:.|..|.||..::||:|
  Fly   679 LRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVG 743

  Fly   456 RTGRAGRPGRAITFFTQEDTSNLRGIALIIKNSGGTVPEYMLQMKKVRKSEAKMRA--KKPLDRE 518
            ||.||||.|||:.|.|..:...:|                .|:.|::|..:..|.|  :..|.::
  Fly   744 RTARAGRKGRAVLFLTPSEAQFVR----------------HLEKKRIRIQQGDMYAYLQTLLPKD 792

  Fly   519 DISTKIRPETKGDEKHKSTKLKKVERTEKILKNRKGYEKDLNSKQKKLGNIKTELKP 575
            |.:..:: |...:.:||...|.:.:| |...|:.|.:.    |..|.......||||
  Fly   793 DEARTVQ-EAASNLQHKFQTLLEDDR-ELHDKSCKAFV----SWMKFYSTFPKELKP 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5589NP_649009.1 SrmB 87..594 CDD:223587 152/581 (26%)
P-loop_NTPase 123..329 CDD:304359 69/249 (28%)
HELICc 349..469 CDD:238034 44/151 (29%)
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 16/81 (20%)
P-loop_NTPase 332..548 CDD:304359 68/219 (31%)
DEXDc 348..554 CDD:214692 63/207 (30%)
HELICc 601..757 CDD:238034 45/156 (29%)
DUF4217 805..866 CDD:290667 13/44 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451621
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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