DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5589 and CG32344

DIOPT Version :9

Sequence 1:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster


Alignment Length:668 Identity:168/668 - (25%)
Similarity:278/668 - (41%) Gaps:171/668 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KDDEDITEFRLLDGDSSNQPKRKKPKKEKTLSPKELEIQKAAEEANETRKQYGIRVLGKNVPPPV 114
            |..::|..|..||.|:..             |.:..:|.|:..:.|   |..|.:.:|..     
  Fly     4 KQADEIPGFPSLDNDAGT-------------SDRGADILKSKSKKN---KSGGFQSMGLG----- 47

  Fly   115 DSFGTLTRDFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPIIN 179
                     |:::    :.:..|.:..|||||.:.:|::|:.|.::|.|.||||||..||.|:..
  Fly    48 ---------FELI----KGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFE 99

  Fly   180 GL-RAHKTTGLRALVLAPTRELAQQIYRECAELTRETGLRTHFI----SKVSEAKQKHGAECKQR 239
            .| |...|.|.|||:|:||||||.|.|:...||.|...|::..:    |..|:....|  .|.  
  Fly   100 KLQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIH--TCP-- 160

  Fly   240 YDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCVA 304
             |::|:||.|...|..:..  |.|:.:|:.|.||||||.|.|   |.|||::......:..:.| 
  Fly   161 -DVIVATPGRFLHLCVEMD--LKLNSIEYVVFDEADRLFEMG---FGEQLNETLHRLPSSRQTV- 218

  Fly   305 FFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQ--GLQP 367
            .||||....:.::|...|.:.|.|.:.|::...:.:..:.|:...: .:..|:..|::.  .:|.
  Fly   219 MFSATLPKLLVEFARAGLNDPVLIRLDVESKLPDALALKFLYCRPD-DRYTALVVLLKYVIPVQS 282

  Fly   368 PVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDF 432
            ..:||..::...:.:...|...||:...:::......|......|....:.|||.|::..||||.
  Fly   283 QTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDI 347

  Fly   433 KGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALII--------KNSG 489
            ..::.|:|..||.....::||:||..||||.|.|.:..:.:||::|..:.|.:        .::.
  Fly   348 PSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNRPFNIHDSSAL 412

  Fly   490 GTVPEYMLQ--------MKK-----------------------VRKSEAKMRAK-------KPL- 515
            ||:|:.:|:        :||                       |..::|..|.|       ||| 
  Fly   413 GTIPQDLLEEEHLTVTDIKKSHHIAGVLRTSENAYKKYLSSRPVASTDANARVKKIKFFALKPLE 477

  Fly   516 -----------------------------------DREDISTKIRPETKG------DEKHKST-- 537
                                               ::.||..|:|....|      :...|||  
  Fly   478 DFFTAAPVLAQAAEASGQSTESQAKVSAAERKLQEEKHDILVKMRSFRPGGTVFELNTTQKSTQF 542

  Fly   538 ---KLKKVERTEKILKNR-KGYEKDLNSKQKKL-------GNIKTELKP----------AGKRKG 581
               |.|:::..|.|.|.| :..|:|::.::|.:       |.:.|..:.          |.||..
  Fly   543 IVMKEKRMQHAEVINKFRQQRAEEDIDEEKKTIEALNPSSGRMPTADEEAISSTFNKVVAPKRLQ 607

  Fly   582 NVE-------KKTKNKNN 592
            |::       ||.|.|.|
  Fly   608 NMDALYKDKPKKKKRKIN 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5589NP_649009.1 SrmB 87..594 CDD:223587 161/631 (26%)
P-loop_NTPase 123..329 CDD:304359 75/210 (36%)
HELICc 349..469 CDD:238034 32/121 (26%)
CG32344NP_612028.4 DEADc 41..243 CDD:238167 76/230 (33%)
DEXDc 54..243 CDD:214692 74/199 (37%)
HELICc 263..384 CDD:238034 32/121 (26%)
DBP10CT 666..721 CDD:285373
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451639
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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