DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5589 and CG14443

DIOPT Version :9

Sequence 1:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster


Alignment Length:464 Identity:113/464 - (24%)
Similarity:209/464 - (45%) Gaps:47/464 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 QPKRKKPKKEKTLSPKELEIQKAAEEANETRKQYGIRVLG---KNVPPPVDSFGTLTRDFKMLPR 129
            |.:.|.|.:....:..:..:.:....|...||::.|.:..   :|:|.||.||.....:..:|  
  Fly   280 QDQSKNPSRPSNYNTWKQPMDEVYNNAANYRKRHNITLTSWNMRNLPEPVLSFERSGFNATIL-- 342

  Fly   130 LQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPII------NGLRAHKTTG 188
              |.|..:.:|.|||||.|...:..:.:.::..:..|:||||.:|.|.|      .||..|| .|
  Fly   343 --QQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPGIMKMHNQRGLMQHK-KG 404

  Fly   189 LRALVLAPTRELAQQIYRECAELTRETGLRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFL 253
            ...|:|...||.|..:.||....|....||||.:  :..::.:..|||    |:||::..|:..:
  Fly   405 PIVLILVDCREAAVMVQREVLYYTNPLELRTHCL--LGNSQWQGHAEC----DLLVASAGRLLQM 463

  Fly   254 LQQEPPLLDLSHVEWFVLDEADRLMEEG-QNNFKEQLDDIYAACS-NPTKCVAFFSATYTVPVAK 316
            :..:..:::|....:.|||..||:::.| :.|....|      |. .|...:...|.:::..:.:
  Fly   464 IDNKKHVVELERCTYLVLDNIDRMIDVGLEGNICRLL------CRLRPHAQLIVSSTSWSSNLKR 522

  Fly   317 WALRHLKNLVRITIGVQNS---ATETVQQELLFVGSEG------GKLVAIRDLVRQGLQPPVLVF 372
            .|.:.|.....|.:|..|:   ..:.::|.:..|....      .:|.||.|  ...:...|:::
  Fly   523 MANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVVNGLSKVERLMKELTAIYD--TSDIPGKVVIY 585

  Fly   373 VQSKERAKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNL 437
            |:.::..::|. :|:.:.:..:.||..|:..:....:..|..|:..:::.|::....:|..|:..
  Fly   586 VKRQKVVEELV-DLIRNCVPCEGIHGGRTAQENQGIIHDFGTGAYNIIVATQMTSNCLDVPGIRY 649

  Fly   438 VINYDFPPTTISYIHRIGRTG--RAGRPGRAITFFTQEDTSNLRGIALIIKNSGGTVPEYMLQMK 500
            |||||||.....|:.|:.|||  ...|....|:|||..:...:..:...:|.....:..::||: 
  Fly   650 VINYDFPDNIDKYVQRMSRTGCLSYNRNCEVISFFTMANYKLVTEVVDFLKICKQEIGPHLLQL- 713

  Fly   501 KVRKSEAKM 509
                :|.||
  Fly   714 ----AEEKM 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5589NP_649009.1 SrmB 87..594 CDD:223587 110/445 (25%)
P-loop_NTPase 123..329 CDD:304359 56/213 (26%)
HELICc 349..469 CDD:238034 30/127 (24%)
CG14443NP_572330.2 P-loop_NTPase 332..535 CDD:304359 57/219 (26%)
DEXDc 345..544 CDD:214692 57/211 (27%)
Helicase_C 560..670 CDD:278689 26/112 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451740
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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