DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5589 and DDX52

DIOPT Version :9

Sequence 1:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_008941.3 Gene:DDX52 / 11056 HGNCID:20038 Length:599 Species:Homo sapiens


Alignment Length:603 Identity:275/603 - (45%)
Similarity:384/603 - (63%) Gaps:61/603 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDEHDIFKLITAGVRFTK-------------KSKKEPSSKQQLQPL---------PEV----SKH 39
            ||.||:|:.:.||.:|..             |.|.:..|.:.||.|         |.|    ..|
Human     1 MDVHDLFRRLGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCGASQTH 65

  Fly    40 EEPVKSEESDKDDEDITE---------FRLLDGDSSNQP---------------KRKKPKKEKTL 80
            ::|   :..:|.:|.:||         .:.:..:.::|.               :.||.::|..|
Human    66 QKP---QNGEKKEESLTERKREQSKKKRKTMTSEIASQEEGATIQWMSSVEAKIEDKKVQRESKL 127

  Fly    81 SPKELE-IQKAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDHPTP 144
            :..:|| ::|  |:.|..|.::.|.|.|.::|.|:.:|..|.:::|:..||.||:|...|..|||
Human   128 TSGKLENLRK--EKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTP 190

  Fly   145 IQMQALPVLLQRRALMACAPTGSGKTLAFLTPIINGLRAHKTTGLRALVLAPTRELAQQIYRECA 209
            |||||:||:|..|.|:|.|||||||||||..||:..|:.....|.|||:::||||||.||:||..
Human   191 IQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELI 255

  Fly   210 ELTRETGLRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEA 274
            :::..||.|.|.|.|.:.|.:|.|.:..:::||||:||||:.:||:|:||.:||:.|||.|:||:
Human   256 KISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDES 320

  Fly   275 DRLMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATET 339
            |:|.|:|:..|::||..|:.||::.....|.||||:...|.:|...:|.|::.::||.:|||.||
Human   321 DKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVET 385

  Fly   340 VQQELLFVGSEGGKLVAIRDLVRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQ 404
            |:|||||||||.|||:|:|:||::|..|||||||||.||||:||.||:|:|||||||||||:|.|
Human   386 VEQELLFVGSETGKLLAVRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450

  Fly   405 RDNCVKAFREGSIWVLICTELMGRGIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITF 469
            |||.|.:||.|.|||||||.|:.|||||||||||||||||.:::.||||||||||||..|:||||
Human   451 RDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITF 515

  Fly   470 FTQEDTSNLRGIALIIKNSGGTVPEYMLQMKKVRKSEAKMRAKKPLDREDIST--KIRPETKGDE 532
            ||::|...||.:|.:|:.:|..||||:...:|:...:.|...||||:||.|||  |...|...|:
Human   516 FTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLERESISTTPKCFLEKAKDK 580

  Fly   533 KHKST---KLKKVERTEK 547
            :.|.|   ..|||...:|
Human   581 QKKVTGQNSKKKVALEDK 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5589NP_649009.1 SrmB 87..594 CDD:223587 246/466 (53%)
P-loop_NTPase 123..329 CDD:304359 98/205 (48%)
HELICc 349..469 CDD:238034 88/119 (74%)
DDX52NP_008941.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..100 6/43 (14%)
SrmB 136..599 CDD:223587 246/465 (53%)
Q motif 165..193 12/27 (44%)
DEAD box 318..321 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599 7/22 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149791
Domainoid 1 1.000 179 1.000 Domainoid score I3557
eggNOG 1 0.900 - - E1_KOG0344
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5093
Inparanoid 1 1.050 488 1.000 Inparanoid score I1437
Isobase 1 0.950 - 0 Normalized mean entropy S1012
OMA 1 1.010 - - QHG56500
OrthoDB 1 1.010 - - D323399at33208
OrthoFinder 1 1.000 - - FOG0003197
OrthoInspector 1 1.000 - - oto89624
orthoMCL 1 0.900 - - OOG6_102417
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1170
SonicParanoid 1 1.000 - - X3665
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1615.790

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