DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42816 and ABCI11

DIOPT Version :10

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:NP_196914.1 Gene:ABCI11 / 831259 AraportID:AT5G14100 Length:278 Species:Arabidopsis thaliana


Alignment Length:206 Identity:59/206 - (28%)
Similarity:100/206 - (48%) Gaps:26/206 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 KMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGF-DIRQERRQAQRCI 413
            ::.::..|:|.:.|....::.|.:|:|||||:.:|||...||||:..|.|: |..|.:....   
plant    64 QLNILNGVNFSLREKSFGLIFGKSGSGKTTLLQLLAGLNKPTSGSICIQGYGDDGQPKADPD--- 125

  Fly   414 GLCPQQNV--------LFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKK---------LNLQE 461
             |.|.:.|        .|....:|.....|...|.....::|.::.:.|::         :.|.:
plant   126 -LLPTEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSNLQRAFNWVGLDSIPLDK 189

  Fly   462 KKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTH 526
            ..:|    ||||.:|||::|..|.....:||.|||..|||..||.::.:|:...|:..|:|:.:|
plant   190 DPQL----LSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVAKLLKHLKKELTLLVVSH 250

  Fly   527 QLDDGEVLGDR 537
            .|.:...|.|:
plant   251 DLRELAALVDQ 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 rim_protein <81..1451 CDD:130324 59/206 (29%)
ABCI11NP_196914.1 ABC_cobalt_CbiO_domain1 52..268 CDD:213192 59/206 (29%)

Return to query results.
Submit another query.