Protein Alignment CG42816 and ABCA6

DIOPT Version :10

• Sequence 1: NP_730301.3
• Gene: CG42816 / 39977
• FlyBaseID: FBgn0261998
• Length: 1459
• Species: Drosophila melanogaster
• Sequence 2: NP_001327229.1
• Gene: ABCA6 / 823931
• AraportID: AT3G47770
• Length: 926
• Species: Arabidopsis thaliana
• Alignment Length: 704
• Identity: 174/704 - (24%)
• Similarity: 317/704 - (45%)
• Gaps: 143/704 - (20%)

  Fly    11 YKTGFLAVQQALSQVHIKHKCKEFNKTQG-DIKFPPIKDLPSPPI-FKSDNSSTLQDVGIMIIVI 73
            ::..::.|.::::.|  .:...:|.:..| .|.|..:|::|.... .:.|.:|.:..:....:::
plant   287 WRVKYVRVPRSVNMV--SNAYLQFLRGPGTKILFDFVKEMPKQETRLRMDMASLIGPIFFTWVIL 349

  Fly    74 IIFFVVVSLTKSIVEEKELQLKVTLNLMGVGSCLQWVAWY-----IQTFII---FLIGSSIITLF 130
            ::|.|:::   |:|.||:.:|::.:.:.|:|....|:..|     |.|..|   .:.||:|...|
plant   350 LLFPVILT---SLVYEKQQRLRIIMKMHGLGDAPYWMISYAYFLAISTLYIVCLMIFGSAIGLKF 411

  Fly   131 WKLVLPNSEISFMPFTHWSMALFVLLVLSHCTICFSFLMSSLISTTYRISLVTFLALIATYLPFL 195
            ::         |..:|...|..|:.:.|.   |..:||:||..|.....|:|.::.:..:.|
plant   412 FR---------FNDYTIQFMFYFLYINLQ---ISIAFLVSSAFSKAVTASVVAYIYVFGSGL--- 461

  Fly   196 ILHSKGCSEGLNVFLSLFLLSGLQV---------------LVVGICMWEDYG--------EGLQW 237
                      |..||..||:..|..               |..|:..:..|.        :|::|
plant   462 ----------LGAFLFQFLIESLSFPRRWIFVMELYPGFSLYRGLYEFSQYAFQRNLNGRDGMKW 516

  Fly   238 GNLFETSWPGGTLSVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQPWHFPCTRCCSTESLLP 302
            .: |..|      ::..:..::|:...::|:...|::::                   |:.|...
plant   517 KD-FRGS------AMDEVFTIIIVEWVVALVATYYIDRV-------------------SSSSKDT 555

  Fly   303 YSRLFNRIFGIYSAAP-------DEERPDLQLIEPDPVDKIA----------------GVQIRGL 344
            ::.|.|.    :..:|       .:||.|:. :|.:.:|.|.                |:....|
plant   556 FAFLKNP----FKLSPTPQMLSFQKERSDVS-VEMEKLDVIQEKETVKQLIFERSKNHGIVCDNL 615

  Fly   345 SKTFGKME------VVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGFDIR 403
            .|.:...:      .|..:|..:..|:...::|.||||||:.|:|:.|.:.|:||:|.:.|.||.
plant   616 KKVYQGRDGNPPKLAVCGLSLAVPSGECFGMLGPNGAGKTSFINMMTGLVKPSSGSAFVQGLDIC 680

  Fly   404 QERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLNLQE--KKRLA 466
            ::..:....:|:|||.::|::.|:...|:..:.||:.|:|.::...|:..||.:||..  ...:.
plant   681 KDMDKVYISMGVCPQHDLLWETLTGKEHLLFYGRLKNLKGHDLNQAVEESLKSVNLFHGGVADIP 745

  Fly   467 ARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTHQLDDG 531
            |...|||.:||||||.||.|..||:..|||||||||::|..||.:|..||:...|:||||.:::.
plant   746 AGKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRINLWTVIKRAKKHAAIILTTHSMEEA 810

  Fly   532 EVLGDRVVIISDGQLRCIGSLPFLKKQVDASCL--ITCEARKRCDLEKLTSLISR------HVGT 588
            |.|.||:.|..||:|:|||:...||.:...|.:  ||.......|:|.|...:|.      |:..
plant   811 EFLCDRLGIFVDGRLQCIGNPKELKGRYGGSYVLTITTSPEHEKDVETLVQEVSSNARKIYHIAG 875

  Fly   589 IQPFSIKGRDVCYKLPLSKSKYFSSLFRDLESQMNILGVRGFSLSSVSLEEIFM 642
            .|.|.....:|          ..|.:|:.:|:......|..:..:..:||::|:
plant   876 TQKFEFPKEEV----------RISEVFQAVENAKRNFTVFAWGFADTTLEDVFI 919

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42816	NP_730301.3	rim_protein	<81..1451	CDD:130324	162/632 (26%)
ABCA6	NP_001327229.1	rim_protein	<341..>923	CDD:130324	164/648 (25%)
		ABC_subfamily_A	614..835	CDD:213230	84/220 (38%)