Protein Alignment CG42816 and ABCA3

DIOPT Version :10

• Sequence 1: NP_730301.3
• Gene: CG42816 / 39977
• FlyBaseID: FBgn0261998
• Length: 1459
• Species: Drosophila melanogaster
• Sequence 2: NP_190358.3
• Gene: ABCA3 / 823928
• AraportID: AT3G47740
• Length: 932
• Species: Arabidopsis thaliana
• Alignment Length: 658
• Identity: 175/658 - (26%)
• Similarity: 310/658 - (47%)
• Gaps: 117/658 - (17%)

  Fly    43 FPPIKDLPSPPI-FKSDNSSTLQDVGIMIIVIIIFFVVVSLTKSIVEEKELQLKVTLNLMGVGSC 106
            |..:|::|.|.. .:.|.:|.:..:....:::::..|:::   |:|.||:.:|::.:.:.|:|..
plant   321 FEFVKEMPKPETKLRLDIASLIGPIFFTWVILLLLPVILN---SLVYEKQQRLRIIMKMHGLGDG 382

  Fly   107 LQWVAWY-----IQTF-IIFL-IGSSIITLFWKLVLPNSEISFMPFTHWSMALFVLLVLSHCTIC 164
            ..|:..|     :.|| |||| |..|:|.|           .|.....:|:......|..:..|.
plant   383 PYWIISYAYFLALSTFYIIFLMIFGSVIGL-----------KFFLLNDFSLQFSFYFVYINLQIS 436

  Fly   165 FSFLMSSLISTTYRISLVTFLALIATYLPFLILHSKGCSEGLNVFLSLFLLSGLQV--------- 220
            .:||:||..|.....|:..:|.:..:.|             |.:||..|||.||..
plant   437 IAFLLSSAFSKVETASVAAYLYVFGSGL-------------LGMFLFQFLLEGLSFPRRWIFVME 488

  Fly   221 LVVGICMWE---DYGEGLQWGNL----------FETSWPGGTLSVGYILLVMILASFLSLLLCLY 272
            |..|..::.   ::.:....|||          |..:      ::..:..::|:..|::|:...|
plant   489 LYPGFSLYRGLYEFSQNAYQGNLNGKDGMKWKYFSDN------AIDEVFYIIIVEWFVALIATYY 547

  Fly   273 LEKIRPGPYGVPQPWHFPCTRCCSTESLLPYSRLFNRIFGIYS-----AAPDEERPDLQLIEPDP 332
            ::|:                 ..|.:.||.:.:..|.....:|     :|...|...|.:|...
plant   548 IDKM-----------------SSSGKDLLFFLKNQNPFKISHSLQKQVSAISVEMEKLDVIHES- 594

  Fly   333 VDKIAGVQIRG----------LSKTF-GK-----MEVVKNVSFDMFEGQITVLMGHNGAGKTTLI 381
             :|:|.:.:..          |.|.: |:     .:.|:.:|..:..|:...::|.||||||:.|
plant   595 -EKVAQLMLESSTSHAIVCDKLRKVYPGRDGNPPKKAVRVLSLAVPSGECFGMLGPNGAGKTSFI 658

  Fly   382 SMLAGFISPTSGTALINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEV 446
            :|:.|.:.||||.|.:.|.||.::..:....:|:|||.::|::.|:...|:..:.||:.|:|.::
plant   659 NMMTGLVKPTSGAAFVQGLDICKDMDRVYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGVDL 723

  Fly   447 KSEVQNYLKKLNL-----QEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARR 506
            ...|:..|:.:||     .:|   .|...|||.:||||||.||.|..||:..|||||||||::|:
plant   724 NQAVEESLRSVNLFHGGVADK---PAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRK 785

  Fly   507 ELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQVDASCLI--TCEA 569
            .||.:|..||....|:||||.:::.|.|.||:.|..||:|:|||:...||.:...|.::  |..:
plant   786 NLWTVIKNAKRHTAIILTTHSMEEAEFLCDRLGIFVDGRLQCIGNPKELKGRYGGSYVLTMTTSS 850

  Fly   570 RKRCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPLSKSKYFSSLFRDLESQMNILGVRGFSLSS 634
            ....|:|.|...:|.:|..|  :.|.|... :::|..:.: .|.:|:.:|...:...|..:.|:.
plant   851 EHEKDVEMLVQEVSPNVKKI--YHIAGTQK-FEIPKDEVR-ISEVFQVVEKAKSNFKVFAWGLAD 911

  Fly   635 VSLEEIFM 642
            .:||::|:
plant   912 TTLEDVFI 919

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42816	NP_730301.3	rim_protein	<81..1451	CDD:130324	168/619 (27%)
ABCA3	NP_190358.3	rim_protein	<303..>932	CDD:130324	175/658 (27%)
		ABC_subfamily_A	614..835	CDD:213230	86/223 (39%)