DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42816 and CG8908

DIOPT Version :9

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:NP_611464.3 Gene:CG8908 / 37293 FlyBaseID:FBgn0034493 Length:1626 Species:Drosophila melanogaster


Alignment Length:1584 Identity:421/1584 - (26%)
Similarity:738/1584 - (46%) Gaps:277/1584 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GFLAVQQALSQVHIKHKCKEFNKTQGDIK-FPPIKDLPSPPIFKSDNSSTLQDVGIMIIVIIIFF 77
            |||.||..||:..|:.|.:.....:..:: :|.:.:     :.:.||...|.  |::.:.:.|  
  Fly   181 GFLVVQAKLSEALIRAKNEAVVLPEVILQHYPDVAE-----VDRLDNRVALG--GVLFLPVTI-- 236

  Fly    78 VVVSLTKSIVEEKELQLKVTLNLMGVGSCLQWVAWYIQTFIIFLIGSSIITLFWKLVLPNSEISF 142
            ....|.:.||.|:...|:..|.||||.:.:.|::|::..|::.    ||.|:|..|:|   :..:
  Fly   237 SAAYLAQMIVMERRDHLRDMLELMGVRAWIYWLSWFLVAFLLL----SIPTVFMVLLL---KWRY 294

  Fly   143 MPFTHWSMALFVLLVLSHCTICFSFLMSSLISTTYRISLVTFLALIATYLPF-LILHSKGCSEGL 206
            ...:..|:.||.|||.:...:..:|::||..|.|..:.:...:..:...||: |:|.....:...
  Fly   295 FSLSDSSLVLFFLLVYNLEVLTSAFMISSFFSDTVGVQVAIVIVHLIGCLPWRLLLMGYVPTLPR 359

  Fly   207 NVFLSLFLLSGLQVLVVGICMWEDYGEGLQWGNLFE-TSWPGGTLSVGYILLVMILASFLSLLLC 270
            .:|:.|||.|.|.:.:......|:...||.|..||| |.| ...:.:|.|||.|:....|.:|:.
  Fly   360 TIFVCLFLNSSLAMGLQQFIKSENLRLGLHWTYLFERTDW-DEFVHLGPILLFMLFGCLLRILVL 423

  Fly   271 LYLEKIRPGPYGVPQPWHFP------CTRCCSTESLLPYSRLFNRIFGIYSAAPDEERPDLQLIE 329
            .|:|::|...   .:.|:||      |.              :||       .|..:..|::..|
  Fly   424 AYMEQLRSYQ---NRKWYFPVQPSFWCR--------------WNR-------RPRSDDFDVEGQE 464

  Fly   330 PDPVDKIAG----VQIRGLSKTFGKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISP 390
            ..    |.|    |:.|.:.|.|.:...||:::.:.::.:|||.:|||.:||:|::.:||||:.|
  Fly   465 TG----IRGHPLIVRARNIEKVFNEWIAVKDLNLNFYQDEITVFLGHNDSGKSTILMLLAGFLRP 525

  Fly   391 TSGTALINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLK 455
            ::|...|||:|:...:|:|::.:.:|||.||||:.:::..|:|.:.||:||...|..:|...||:
  Fly   526 SAGEITINGYDLATNQRKARQSMCICPQPNVLFEKVNARWHLQFYCRLKGLNRQEASAETDKYLE 590

  Fly   456 KLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEGCT 520
            ...||:......:||..|.:|.|.:.|:|||..|:|:.|||.|.:||:.|..:|.|:...::|..
  Fly   591 IGRLQDFANTKVKNLPSGIKRMLMLCCNLCGNSKILLLDEPGTSMDPAMRSNMWDLLRRERKGRC 655

  Fly   521 ILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKK--QVDASCLITCEARKRCDLEKLTSLIS 583
            |::.||.:::.||:.|::|::.|.|:...|:..||.:  ...:|.|:.|.....|.:.::|:.:.
  Fly   656 IIMATHNMNEAEVVADQIVVLCDAQVIGYGTTGFLTQIAGTGSSYLLICTKMDTCIVAEVTNFLQ 720

  Fly   584 RHVGTIQ---PFSIKGRDVCYKLPLSKSKYFSSLFRDLESQMNILGVRGFSLSSVSLEEIFMSFG 645
            .....|:   .|||.   |.|:||....:.:::||.:||..:..|.:...|:.:.:|..:|:..|
  Fly   721 IRFPDIKLHNEFSIY---VTYELPTKYVQQYAALFLELEEALGELNLAEISVCAPTLGSVFLQMG 782

  Fly   646 AEDLNSRQSGGAEKRDD------------------DDRDDDEENEVQDGNVRSCKKQWRAMMTKK 692
            .|   .|||.......|                  :.|:|       ||.|:.| .||||::.||
  Fly   783 EE---MRQSWNRISSFDLLSSPSPMLSLLNLLPTFEVRED-------DGRVKCC-NQWRAIVEKK 836

  Fly   693 VMALYDNKVYFLLLLLTPIVYYIT----TLMMATKPHHSGRPTFNISDYGV-DKFTILLSVPVSK 752
            .:....::.::.:::.|||:..:.    ::.:....||...  ..::|..: .|...::..|...
  Fly   837 RLFTLRHQKFYCMIIATPIIICLLIISFSIFIFLVDHHLSE--LLVTDLSIYPKAVFVIDSPAEG 899

  Fly   753 SYTEERRADSIASLI-KGKLKLIVVSEQIKDYVDDKWKSREGRREINFVSMAIDTGDRTGLIGWV 816
            :..|..   .:|::| :|..........|.||:..:.:|.:.:.:..|::.|....:...:|.|.
  Fly   900 NRFERH---YMANVIGQGGTVRSTSGTPIDDYLLAEMESDQVKVQHTFLAGATFDSNANSIIAWS 961

  Fly   817 GPRHYVHAAPMILNLVYNALAQELIGPKISIEVTSVPF--TLRKKEDFLI-SNNGDIPIYVIGYV 878
            ..: ..|.:.:.:.|||.|:.|||  .|:.|.:.:.|:  |:::....|| ::..:..:.|..|:
  Fly   962 NNK-LKHGSALSMGLVYAAIGQEL--AKLDIRIVNKPYQDTVQQAVRGLIYASTIEFAVLVFHYL 1023

  Fly   879 SIAMIIFSSAVIQERVSHMKMLQEVSGLEMITYWLSHLAFDMVVFFILVLALLLPLYGYAPWYLL 943
            .:...||:...|.||.|.::..|..||:...|||||||::|    :...:|::|||         
  Fly  1024 VLGTAIFAVLPIVERRSKVQHQQFSSGMSRSTYWLSHLSWD----YCFYIAMILPL--------- 1075

  Fly   944 LCVLFFTGLAGLIFIYFLISMLSATFLAVSMILLSVIIG-------SLILMI--LGALALIF--- 996
               :...|:.....:..::.:|:..|.|:|...|..::.       |:||.|  :|.|||..   
  Fly  1076 ---IVVAGITIGSVLPVIVQLLAFGFSAISFTYLLCLMSNDFGKMFSIILYINMIGVLALFIHPK 1137

  Fly   997 --KMVYVAI-YVANMHPLIAGYNCIQKCFHYMSLCGSYISEAQNPLSENLTSDEMYCINPLAFLE 1058
              :..|..| .|..:||            ||...||.|.:...:..|          :..|.:  
  Fly  1138 SPQTRYAVIESVLLVHP------------HYSLCCGMYEAIRMSTFS----------LKQLPY-- 1178

  Fly  1059 PRCVCVNPMTWPDMLVMLGTAIILFLLIMFFEYGSCVWYRCKGCCPYSSKGSIEDPKV------- 1116
                          |:..|.|   :|.|:.|     .|...:  ..|..| ||.:.|:       
  Fly  1179 --------------LIFSGAA---YLTIVVF-----AWVPRR--LNYVFK-SIRNEKIYPSYKDE 1218

  Fly  1117 SREAEKIRA----MDADQIGTRALVVNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGKTT 1177
            .:|.:|:|.    :.........|::..:||:|| ..:||.:::..|.|..||||||.||:||::
  Fly  1219 DKEVDKMRRRLAYLTTAHYAFFPLILKNLSKRYG-SFVAVRSLTLDLNPFECVGLLGRNGSGKSS 1282

  Fly  1178 TFKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSK 1242
            .|:||||..||..|:|:|.|||::.:...|.:.:|:||:......|:||:..|:...||.|...:
  Fly  1283 IFRMIVGMESITVGSIHIKGYSLKTRPKDASRHVGFCPRELMLLSFMTGKDALRFCCLINGIRRE 1347

  Fly  1243 DLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVACGANSLICLDEPSAGVDPASRRHVWT 1307
            .:......||:.|....|::|:|:.||.|||||:..|:...|.||:|||||:||||..::..:|:
  Fly  1348 YIKSLVASLAECFELVPHMNKRISTYSNGTKRKLMIAMGTLAPSLMCLDEPTAGVDMHAKYEIWS 1412

  Fly  1308 IINEVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKGMTLKLVV----- 1367
            |::.:.|.|:::|||:||::|...||:...|:..||:...||:..:|::...|:.:|:.:     
  Fly  1413 ILDGIRQGGRSILLTTHNLEECEFLCTNVGIMDHGSLLCYGSLSRLKHRFNMGIFVKVKMGTRAE 1477

  Fly  1368 ----------------------------------------------------NVQPD------NM 1374
                                                                ..|||      ||
  Fly  1478 MDDERDNWMQITMMPPNDSEMGSTVGARRMMLAHLLRHHNPPVEPVKKSRTSRAQPDTTNSELNM 1542

  Fly  1375 ----VAMLTKIEDDIYMTYPNAELKEKYEFSGRLTFQISK-DTSWSEIFEYVEGNRSSWHLEDYS 1434
                .|:|.::|:.....:|.:.:.|||.:.|.:||.|.: ...||.||||:|..:....:..||
  Fly  1543 RKDYEALLQELEEVFKKDHPYSTVSEKYSYRGMITFCIPRGQIKWSAIFEYMENLKDEMQILYYS 1607

  Fly  1435 LSQPSLEDAFEEIAEERRKKKSNQ 1458
            :|..:.:|.|.:..     :|.||
  Fly  1608 VSHTTFQDVFMKFV-----RKQNQ 1626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 CcmA 336..643 CDD:224054 102/315 (32%)
ABC_subfamily_A 339..556 CDD:213230 78/216 (36%)
ABC2_membrane_3 <821..1018 CDD:289468 56/214 (26%)
CcmA 1135..1450 CDD:224054 117/382 (31%)
ABC_subfamily_A 1136..1354 CDD:213230 86/217 (40%)
CG8908NP_611464.3 ABC2_membrane_3 69..394 CDD:289468 59/228 (26%)
LivG 471..686 CDD:223488 76/214 (36%)
ABC_subfamily_A 474..691 CDD:213230 78/216 (36%)
ABC2_membrane_3 845..1192 CDD:289468 88/411 (21%)
NatA 1242..1461 CDD:226927 87/219 (40%)
ABC_subfamily_A 1242..1459 CDD:213230 86/217 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3135
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 228 1.000 Inparanoid score I138
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 1 1.000 - - otm51427
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - P PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X215
98.970

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