DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42816 and CG11147

DIOPT Version :9

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster


Alignment Length:854 Identity:162/854 - (18%)
Similarity:314/854 - (36%) Gaps:252/854 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 IAGVQIRGLSKTFGKME----VVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTAL 396
            :|.|::|...|.:|...    |:..::.::..|.|..|:|.:|.|||||:|.:.|......|..:
  Fly     1 MAAVEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVV 65

  Fly   397 I-------NGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYL 454
            :       .|..:...|      :|..||:..|.:.::....|..|.|:.||....::.:.: .|
  Fly    66 VLGAKPGEPGSGVPGSR------VGFMPQEIALVEEMTVKETIFYFGRIYGLTDERIREKFK-LL 123

  Fly   455 KKLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEG- 518
            |:|......|...:..|||.|||||.||::....::||.|||:.||||..|.::|..::|.... 
  Fly   124 KELLQLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNS 188

  Fly   519 -CTILLTTHQLDDGEVLGDRVVIISDGQLRCIG----------------SLPFLKKQVDASCLIT 566
             ..:::|||.:::.:            |..|||                .:.|..:.::.:.||.
  Fly   189 KLAVIITTHYIEEAK------------QANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFLIL 241

  Fly   567 CEARKRCDLEKLTSLISRH--------------VGTIQPFSIKGRDVCYKLPLSKSKYFSSLFRD 617
              ::::.:.::|..::..:              :.|.:|...:.:.:.::.||::::        
  Fly   242 --SQRQGNEDELAQIMDHNKNQALPAAVLPPEVIDTHEPNMPEKQPIPFEEPLNENR-------- 296

  Fly   618 LESQMNILGVRGFSLSSVSLEEIFMSFGAEDLNSRQSGGAEKRDDDDRDDDEENEVQDGNVRSCK 682
                                ::||.                                     :.|
  Fly   297 --------------------KKIFF-------------------------------------TTK 304

  Fly   683 KQWRAMMTKKVMALYDNKVYFLLLLLTPIV----YYI------TTLMMATKPHHSGRPTFNISDY 737
            .:.:|:|||..:.|:......:.:||.||:    :|:      |.|.:..   :||    .:.:|
  Fly   305 GRVKALMTKNFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNLEIGV---YSG----EVENY 362

  Fly   738 G-------------VDKFTILLS-------------VPVSKSYTEERRA--DSIASLIKGKLKLI 774
            |             .|..:.|.:             |...|.|..|..|  |:..:...|.|...
  Fly   363 GECFDENLVTVYKDSDNESCLFNKLSCRYIRVLGDDVATRKYYASEADALNDAKRATTVGYLHFA 427

  Fly   775 V-VSEQIKDYVDDKWKSREGRREINFVSMAIDTGDRTGLIGWVGPRHYVHAAPMILNLVYNALAQ 838
            . .|:.|...::|...|.:|..:...:|:.||..|:.  :.:...|.        |...::...:
  Fly   428 QNFSDSILSVMEDGIHSSDGAVDHAELSIHIDMTDQQ--VAYFMQRK--------LRDKFSTFMR 482

  Fly   839 ELIGP-KISIEVTSVPFTLRKKEDFLISNNGDIPIYVIGYVSIAMIIF------SSAVIQERVSH 896
            .::.. .:|..:..:|  ::.:|....|.:.:...|....|.:.|:.|      ::..|.||:..
  Fly   483 SVVKDCNVSTAIVDLP--VQFQEPIFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFISERMDG 545

  Fly   897 M---KMLQEVSGLEMITYWLSHLAFDMVVF------FILVLALLLPLYGYAPWYLLLCVLFFTGL 952
            :   .:|..||..||:  | :||...:::.      .|:.:.|:...|.......|:.:|..|..
  Fly   546 IWDRTLLAGVSATEML--W-AHLLTQLIIMALQSFEVIMYIGLVFDTYNNGDTTTLIGLLTLTAF 607

  Fly   953 AGLIFIYFLI----SMLSATFLAVSMILLSVIIGSLILMILGALALIFKMVYVAIYVANMHPLIA 1013
            .|::|..|:.    |...|.|:|.......:|:..|:..:......:..:|.|..:..   |.|:
  Fly   608 CGMLFGLFISVFCKSHTEANFVATGAFYPMIILCGLLWPLESMPQFLQDLVMVLPFTI---PSIS 669

  Fly  1014 GYNCIQKCFHYMSLCGSYISEAQNPLSENLTSDEMYCINPLAFLEPRCVCVNPMTWPDMLVMLGT 1078
            ..|.|:|.:                   ::|.:::|                    ...|||.|.
  Fly   670 ARNVIEKGW-------------------SITHEKVY--------------------NGFLVMAGW 695

  Fly  1079 AIILFLLIM 1087
            .||.|:|.:
  Fly   696 TIIFFVLCL 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 CcmA 336..643 CDD:224054 73/349 (21%)
ABC_subfamily_A 339..556 CDD:213230 63/245 (26%)
ABC2_membrane_3 <821..1018 CDD:289468 40/216 (19%)
CcmA 1135..1450 CDD:224054
ABC_subfamily_A 1136..1354 CDD:213230
CG11147NP_608954.1 CcmA 1..282 CDD:224054 69/301 (23%)
P-loop_NTPase 4..222 CDD:304359 62/236 (26%)
ABC2_membrane_3 322..702 CDD:289468 82/443 (19%)
ABC2_membrane 469..664 CDD:279410 38/207 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46598
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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