Protein Alignment CG42816 and CG11147

DIOPT Version :10

• Sequence 1: NP_730301.3
• Gene: CG42816 / 39977
• FlyBaseID: FBgn0261998
• Length: 1459
• Species: Drosophila melanogaster
• Sequence 2: NP_608954.1
• Gene: CG11147 / 33803
• FlyBaseID: FBgn0031734
• Length: 711
• Species: Drosophila melanogaster
• Alignment Length: 854
• Identity: 162/854 - (18%)
• Similarity: 314/854 - (36%)
• Gaps: 252/854 - (29%)

  Fly   336 IAGVQIRGLSKTFGKME----VVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTAL 396
            :|.|::|...|.:|...    |:..::.::..|.|..|:|.:|.|||||:|.:.|......|..:
  Fly     1 MAAVEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVV 65

  Fly   397 I-------NGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYL 454
            :       .|..:...|      :|..||:..|.:.::....|..|.|:.||....::.:.: .|
  Fly    66 VLGAKPGEPGSGVPGSR------VGFMPQEIALVEEMTVKETIFYFGRIYGLTDERIREKFK-LL 123

  Fly   455 KKLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEG- 518
            |:|......|...:..|||.|||||.||::....::||.|||:.||||..|.::|..::|....
  Fly   124 KELLQLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNS 188

  Fly   519 -CTILLTTHQLDDGEVLGDRVVIISDGQLRCIG----------------SLPFLKKQVDASCLIT 566
             ..:::|||.:::.:            |..|||                .:.|..:.::.:.||.
  Fly   189 KLAVIITTHYIEEAK------------QANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFLIL 241

  Fly   567 CEARKRCDLEKLTSLISRH--------------VGTIQPFSIKGRDVCYKLPLSKSKYFSSLFRD 617
              ::::.:.::|..::..:              :.|.:|...:.:.:.::.||::::
  Fly   242 --SQRQGNEDELAQIMDHNKNQALPAAVLPPEVIDTHEPNMPEKQPIPFEEPLNENR-------- 296

  Fly   618 LESQMNILGVRGFSLSSVSLEEIFMSFGAEDLNSRQSGGAEKRDDDDRDDDEENEVQDGNVRSCK 682
                                ::||.                                     :.|
  Fly   297 --------------------KKIFF-------------------------------------TTK 304

  Fly   683 KQWRAMMTKKVMALYDNKVYFLLLLLTPIV----YYI------TTLMMATKPHHSGRPTFNISDY 737
            .:.:|:|||..:.|:......:.:||.||:    :|:      |.|.:..   :||    .:.:|
  Fly   305 GRVKALMTKNFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNLEIGV---YSG----EVENY 362

  Fly   738 G-------------VDKFTILLS-------------VPVSKSYTEERRA--DSIASLIKGKLKLI 774
            |             .|..:.|.:             |...|.|..|..|  |:..:...|.|...
  Fly   363 GECFDENLVTVYKDSDNESCLFNKLSCRYIRVLGDDVATRKYYASEADALNDAKRATTVGYLHFA 427

  Fly   775 V-VSEQIKDYVDDKWKSREGRREINFVSMAIDTGDRTGLIGWVGPRHYVHAAPMILNLVYNALAQ 838
            . .|:.|...::|...|.:|..:...:|:.||..|:.  :.:...|.        |...::...:
  Fly   428 QNFSDSILSVMEDGIHSSDGAVDHAELSIHIDMTDQQ--VAYFMQRK--------LRDKFSTFMR 482

  Fly   839 ELIGP-KISIEVTSVPFTLRKKEDFLISNNGDIPIYVIGYVSIAMIIF------SSAVIQERVSH 896
            .::.. .:|..:..:|  ::.:|....|.:.:...|....|.:.|:.|      ::..|.||:..
  Fly   483 SVVKDCNVSTAIVDLP--VQFQEPIFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFISERMDG 545

  Fly   897 M---KMLQEVSGLEMITYWLSHLAFDMVVF------FILVLALLLPLYGYAPWYLLLCVLFFTGL 952
            :   .:|..||..||:  | :||...:::.      .|:.:.|:...|.......|:.:|..|..
  Fly   546 IWDRTLLAGVSATEML--W-AHLLTQLIIMALQSFEVIMYIGLVFDTYNNGDTTTLIGLLTLTAF 607

  Fly   953 AGLIFIYFLI----SMLSATFLAVSMILLSVIIGSLILMILGALALIFKMVYVAIYVANMHPLIA 1013
            .|::|..|:.    |...|.|:|.......:|:..|:..:......:..:|.|..:..   |.|:
  Fly   608 CGMLFGLFISVFCKSHTEANFVATGAFYPMIILCGLLWPLESMPQFLQDLVMVLPFTI---PSIS 669

  Fly  1014 GYNCIQKCFHYMSLCGSYISEAQNPLSENLTSDEMYCINPLAFLEPRCVCVNPMTWPDMLVMLGT 1078
            ..|.|:|.:                   ::|.:::|                    ...|||.|.
  Fly   670 ARNVIEKGW-------------------SITHEKVY--------------------NGFLVMAGW 695

  Fly  1079 AIILFLLIM 1087
            .||.|:|.:
  Fly   696 TIIFFVLCL 704

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42816	NP_730301.3	rim_protein	<81..1451	CDD:130324	162/854 (19%)
CG11147	NP_608954.1	CcmA	4..245	CDD:440746	65/261 (25%)
		ABC2_membrane_3	322..702	CDD:463674	82/443 (19%)
		YadH	513..710	CDD:440604	47/237 (20%)