DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42816 and CG1801

DIOPT Version :9

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster


Alignment Length:1609 Identity:324/1609 - (20%)
Similarity:634/1609 - (39%) Gaps:324/1609 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DGSYPLY-KTGFLAVQQALSQVHIKHKCKEFNKTQGDIKFPPIKDLPSPPI-------FKSDNSS 61
            |....:| :.|||.:|.   |:.::.    :::.:.||    :...|.|.:       ..:|...
  Fly   189 DKQQDIYIREGFLQLQH---QIFVEW----YHQLRKDI----VSTYPEPNVEVYNILLKAADEPC 242

  Fly    62 TLQDVGIM------IIVIIIFFVVVSLTKSIVEEKELQLKVTLNLMGVGSCLQW-------VAWY 113
            ::..|..:      .|.::.|..::....:.||:            || ...||       :.|.
  Fly   243 SVMSVAQLPTFLYNFIYLLPFLNIIRNVAAQVED------------GV-MVHQWHYGYSFGMQWG 294

  Fly   114 IQTFIIFL-------IGSSIITLFWKLVLPNSE------ISFMPFTHWSMALFVLLVLSHCTICF 165
            |:..::||       |.:.::..||.......|      |:|:.|    :.|:.:.:     |..
  Fly   295 IKFLVLFLRMCILGVIYTIMLLAFWGFGGREGEFSGTGTIAFVCF----ITLYTVEI-----IIT 350

  Fly   166 SFLMSSLISTTYRISLVTFLALIATYLPFLILHSKGCSEGLNVFLSLFLLSGLQVLVVGICMWED 230
            ..:::.|.:......|...:..:..|..|.|:..:...  ::.:...|:|       |..|..:.
  Fly   351 GMVVAKLFANPTNAVLFALMLWLFMYAAFCIILERYWD--IHKYYVFFIL-------VAFCNCQM 406

  Fly   231 YGEGLQWGNLFETSWPGGTLSVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQPWHFPCTRCC 295
            :.....:.|..|......|:....|....|.::.:..|:.|.::...||.:              
  Fly   407 HFSMSLFRNCIEKPEMVNTIDFVLIFTSAISSALIYFLILLAIQWRMPGTF-------------- 457

  Fly   296 STESLLPYSRLFNRIFGIYSAAPDE---------ERPDLQLIEPDPVDKIAGVQIRGLSKTF--G 349
                      |..||.........|         ..|..|..|...|..:..:::|.:|.:.  .
  Fly   458 ----------LSRRIVNNRPRKQQESDTTIMYLGRAPSFQNFEFGDVGSVELMRLRHVSTSHRDS 512

  Fly   350 KMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGFDIRQERRQAQRCIG 414
            :.:::||:|..::.|::.|::||.|:||.||:.:|||...|..|...|.|... :...:|:|.:.
  Fly   513 ERKILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNPF-EPNGEARRLVD 576

  Fly   415 LCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQ--NYLKKLNLQ-EKKRLAARNLSGGTQR 476
            ....::.|.|||:....|....||:.......:.|::  .:|..|:.. |.:.:....||.|:.:
  Fly   577 FRFDEHGLNKHLTVEQTIDYHVRLKLSPSESDRYEIERRKWLAILDQHVESRGVRIGKLSSGSMK 641

  Fly   477 RLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVII 541
            .:::.|.|.|...::|.:||:|.|.....:..|.::...||....::.|:.:.:.|.:.||:.|:
  Fly   642 LVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGIL 706

  Fly   542 SDGQLRCIGSLPFLKKQVDASCLITCEARKRCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPLS 606
            |.|.|...|:..||:.:..:|..:....:.....:.:|..|::.:..|:|.:..|..:.|:||:.
  Fly   707 SMGVLEASGTPFFLRSKFSSSVDLVIIKKPHVPDQPITDYINQFMQNIEPENEIGDSLTYRLPVI 771

  Fly   607 KSKYFSSLFRDLESQMNILGVRGFSLSSVSLEEIFM----SFGAEDLNSRQSGGAEKRDDDDRDD 667
            .......|...||....:||:....:....|.:|:|    ||..:          ::...|....
  Fly   772 YRPRLQKLLIHLEIDRKMLGIENVRVVGAELSDIYMTLVTSFRLQ----------QQMIPDVTQT 826

  Fly   668 DEENEVQDGNVRSCKKQWRAMMTKKVMALYDNKVYFLLLLLTPIVYYITTLMMATKPHHSGRPTF 732
            .:...|....:  .|::.|||..||::....|        :.||:...|:.::...         
  Fly   827 FKYQVVSQKQL--TKQRMRAMFYKKMIHTAPN--------VWPIIMIFTSFVLIAI--------- 872

  Fly   733 NISDYGVDKFTILLSVPVSKSYTEERRAD------------------------SIASLIK-GKLK 772
                  :.:.::||.:|      :||:..                        .|.|.:| .|.|
  Fly   873 ------IARLSVLLDMP------KERQNSIHIGFREPEDVVKYLPNLKDCGYIDIRSAVKVNKKK 925

  Fly   773 LIVVSEQIKD--YVDDKWKSREGRREINFVSM--AIDTGDRTGLIGWVGPRHYVHAAPMILNLVY 833
            .:.||....|  :|.:|...|...|:.|.:..  |:::.....|.|::. :...|:|||:|||:.
  Fly   926 SVGVSRTFDDDSFVCEKGSYRNNLRKKNELRSFGAVESDGDEHLNGYIS-QDMFHSAPMMLNLLQ 989

  Fly   834 NALAQ-------ELIGPKISIEVTSVPFTLRKKEDFLISNNGDI--PIYVIGYVSIAMIIFSSAV 889
            |.:.:       :|:   :.:|...:|..|.:|.:.|.:....|  |:.|...:.:.:.:|...:
  Fly   990 NVILRLSYPMQTDLV---VLVENHPLPTQLSQKINVLDNKIAHIHVPLVVGCIIPLTVSVFVIPL 1051

  Fly   890 IQERVSHMKMLQEVSGLEMITYWLSHLAFDMVVFFI--LVLALLLPL-----YGYAPWYLLLCVL 947
            ::|.:..::.||.::||.:..:|..:|.:|...||:  :::.:::.|     :|:....:::.:|
  Fly  1052 VEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFVYSVIIVVIMSLMGIGGFGFYENAIMVVLL 1116

  Fly   948 FFTGLAGLIFIYFLISMLSATFLAVSMILLSVIIGSLILMIL--GALALIFKMVY--------VA 1002
            ...|||.|...|.           |||.:...|:.:.::.:|  |...|:..::|        :.
  Fly  1117 TTFGLAALPLTYL-----------VSMFVNKSIVRAFLVSVLLQGVSGLVLYIIYWDVANSNTIF 1170

  Fly  1003 IYVANMHP---LIAGYN-----------CIQKCFHYMSLCGSYISEAQNPLSENLTSDEMYCINP 1053
            .|.|.|.|   |:.|.:           ||.||            ||.:..:|...::       
  Fly  1171 FYAACMSPGFSLLDGVSNVYAQNLEQAICIDKC------------EATDSCTEENMNE------- 1216

  Fly  1054 LAFLEPRCVCVNPMTW------PDMLVMLGTAIILFLLIMFFEYGSCVWYRCK------------ 1100
               :.|.|.......|      |.:|.|:.:|:|..:||.:.|    :..|.|            
  Fly  1217 ---VVPNCKFDTFFKWAAPGILPPILYMVLSALIFLMLIFWIE----LHRREKKFHTSRDLRKMR 1274

  Fly  1101 -GCCPYSSKGSIEDPKVSREAEKIRAMDADQIGTRALVVNGVSKKYGCDQLAVNNISFALKPSHC 1164
             ...|:.. |.:.|.|     :||...|..:......:|:.|..:.......::.:||||.....
  Fly  1275 TATYPFDD-GDVADVK-----QKIAEADNTKAKQSVFLVDQVEARVPAAGKRIHTVSFALNKYMS 1333

  Fly  1165 VGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQL 1229
            :|:.||..:||:...:.:||:.....|.||:.|...:.........:||.||.......||.|:.
  Fly  1334 MGIFGPRNSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREH 1398

  Fly  1230 LKVFLLIWGFPSKDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVACGA-NSLICLDEP 1293
            :::..:|.|.|...:.::...|.........:.:|.:..:...:.|:..|:|..| |.::.||||
  Fly  1399 IRLLCMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEP 1463

  Fly  1294 SAGVDPASRRHVWTIINEVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIA 1358
            :.|:...:||.:|.|:..:...||.::..:::..|...|....::..|..:.|:||:|:::.|.:
  Fly  1464 TCGMPATTRREIWNILRYIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYS 1528

  Fly  1359 KGMTLKLVVNVQPDNMVAMLTKIEDDIYMTYPNAE-----LKEKYEFSGRLTFQISKDTSW---- 1414
            .|..|:  |.:..|.  |.|.:.|:::.....|..     |..:.|..|||       .:|    
  Fly  1529 HGFYLE--VRLIRDG--ATLAESEENLRKDVENLAKFVNFLHNRSELVGRL-------NNWFKFY 1582

  Fly  1415 --------SEIFEYVEGNRSSWHLEDYSLSQPSLEDAFEEIAEERRKKK 1455
                    |.::..:|.|:...::.||.:.|..:.....::.|.|.:.|
  Fly  1583 VPVGHIVYSFLYGAMEKNKLRLNVSDYCIYQADMMSVVAQVQETRAQLK 1631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 CcmA 336..643 CDD:224054 76/315 (24%)
ABC_subfamily_A 339..556 CDD:213230 58/221 (26%)
ABC2_membrane_3 <821..1018 CDD:289468 50/236 (21%)
CcmA 1135..1450 CDD:224054 73/332 (22%)
ABC_subfamily_A 1136..1354 CDD:213230 52/218 (24%)
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 25/154 (16%)
ABC2_membrane_4 <293..448 CDD:289500 28/172 (16%)
EcfA2 499..717 CDD:224047 57/218 (26%)
P-loop_NTPase 500..721 CDD:304359 58/221 (26%)
ABC2_membrane_3 <972..1254 CDD:289468 67/318 (21%)
EcfA2 1307..1521 CDD:224047 51/213 (24%)
P-loop_NTPase 1324..1524 CDD:304359 50/199 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 40 1.000 Domainoid score I3722
eggNOG 1 0.900 - - E2759_KOG0059
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 228 1.000 Inparanoid score I138
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 1 1.000 - - otm51427
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X215
98.970

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