DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42816 and Abca15

DIOPT Version :10

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:NP_796187.2 Gene:Abca15 / 320631 MGIID:2388709 Length:1668 Species:Mus musculus


Alignment Length:1577 Identity:467/1577 - (29%)
Similarity:762/1577 - (48%) Gaps:227/1577 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 YLADGSYPLYKT-GFLAVQQALSQVHIKH-----KCKEFNKTQGDI-----KFPPIKDLPSPPIF 55
            |.|||..|.|.| ||||||.||.:..:.|     ....||    ||     :||       .|.:
Mouse   194 YEADGGSPGYITEGFLAVQHALDKAIMLHHGGADAAALFN----DISLFIQRFP-------YPAY 247

  Fly    56 KSDNSSTLQDVGI-MIIVIIIFFVVVSLTKSIVEEKELQLKVTLNLMGVGSCLQWVAWYIQTFII 119
            ..|.........| :.:....||....|..|||.|||.:||....::|:.:.:.|||::.....:
Mouse   248 YHDYFYLFATTFIPLTVACTFFFNHYVLVWSIVWEKENRLKEYQLMIGLRNWMFWVAYFFTFLCL 312

  Fly   120 FLIGSSIITLFWKLVLPNSEISFMPFTHWSMALFVLLVLSHCTICFSFLMSSLIS-TTYRISLVT 183
            :.|  :||.:...|.:.........:...::....||..:..:|.|||::|:|.: .:..:||.:
Mouse   313 YFI--NIIVMCMVLFVKIEPAPIFQYNDPTLVFIFLLFYAISSIFFSFMVSTLFNKVSLAMSLGS 375

  Fly   184 FLALIATYLPFLILH-------SKG---CSEGLNVFLSLFLLSGLQVLVVGICMWEDYGEGLQWG 238
            ||..: ||.|.:.:|       ||.   .|...||.::.    |.:.||    ..:....|::|.
Mouse   376 FLFFL-TYFPAVAMHQSFERMPSKQKLIWSFDFNVGMAF----GFRFLV----NTDAKKTGMKWS 431

  Fly   239 NLFETSWPGGTLSVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQPWHFPCTRCCSTESLLPY 303
            |:| .|....:....|:|.:::..:|:..|:..|:|.:.||.||||:||:|          .|.:
Mouse   432 NIF-LSTDSDSFLFAYVLGMLLADAFIYGLVAWYIEAVFPGEYGVPKPWNF----------FLMH 485

  Fly   304 SRLFN-------RIFGIYSAAPDEERPDLQLIEPDPVDKIAGVQIRGLSKTFGKME----VVKNV 357
            |..|.       .|...|      ||.:.:..|.:|.|..||:||:.|.|.|.|..    .:|::
Mouse   486 SYWFGEPPQQKLEITQFY------ERVESKYFEAEPTDLTAGIQIKHLHKVFQKNNTTKVAIKDL 544

  Fly   358 SFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGFDIRQERRQAQRCIGLCPQQNVL 422
            |.:::|||:|||:|||||||:|.:|:|:|...||||.|.::|.||.|...|.:..:|||||||:|
Mouse   545 SLNLYEGQVTVLLGHNGAGKSTTLSILSGLYPPTSGEAYVHGEDISQHMDQVRNSLGLCPQQNLL 609

  Fly   423 FKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLNLQEKKRLAARNLSGGTQRRLSVACSLCGG 487
            |.||:...|:..:.|::|:.......|..|.|...||.||....:::||||.:|:|::..:|.||
Mouse   610 FDHLTVSEHLYFYCRIKGVPQKMYLEETNNMLSAFNLMEKCDAFSKSLSGGMKRKLAIIIALIGG 674

  Fly   488 VKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSL 552
            .||.|.|||::|:||::||..|.::...|:..|||||||.:|:.:|||||:.|:..|.|||.||.
Mouse   675 SKVAILDEPTSGMDPASRRSTWDILQTYKQNRTILLTTHYMDEADVLGDRIAIMVRGTLRCCGSS 739

  Fly   553 PFLKKQVDASCLITCEARKRCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPLSKSKYFSSLFRD 617
            .|||:.......:.......||:.:::.||..:|.|....:..|.::.:.||...:..|.:||..
Mouse   740 VFLKRLYGVGSHLVMVKEPYCDIAEISKLIHSYVPTATLETNVGNELSFILPKEYTHRFEALFTA 804

  Fly   618 LESQMNILGVRGFSLSSVSLEEIFMSF-----GAEDLNSRQSGGAEKRDDDDRDDDEENEV---- 673
            ||.....||:..|.:|..::||:|:..     ...|:.:.||.....:.:.:.|.:....|    
Mouse   805 LEENQENLGISSFGVSITTMEEVFLKVSNLEDSKTDIEATQSPSVGSKGNKNGDVESSGRVGFPT 869

  Fly   674 --QDGNV---RSCK---KQWRAMMTKKVMALYDNKVYFLLLLLTPIVYYITTLMMATKPH---HS 727
              :|.|:   ..|.   :|:|||..|::|..:.|....|:.:|..|   |:|.:: .|.|   :.
Mouse   870 QSEDQNIVFNTGCSLYLQQFRAMFMKRLMYNWRNWRGILVQILGLI---ISTFLL-LKSHEFRYK 930

  Fly   728 GRPTFNISDYGVDKFTILLSVPVSKSYTEERRADSIASLIKGKLKLIVVSEQIKDYVDDKWKSRE 792
            .....|:.:||.   ||   ||.| .:.:.....|:.:.::..||  ..:.|:|:...|..|..|
Mouse   931 KIRQMNLDEYGQ---TI---VPFS-IWGKSNLTSSLLTHLENMLK--PGNHQLKEVQGDLLKYLE 986

  Fly   793 GRRE---INFVSMAID-TGDRTGLIGWVGPRHYVHAAPMILNLVYNALAQELIGPKISIEVTSVP 853
            |..|   :..::::|. ..:|..|........| |:..:.|.::.|.|...|.|...||.|.:.|
Mouse   987 GNDECVHLCVIALSIKVVANRVNLTVLFNNEAY-HSPSLSLTVLDNILFMSLSGSDASITVFNKP 1050

  Fly   854 FTLRKKEDFLISNNGDIPIYVIGYVSIAMII--FSSAVIQERVSHMKMLQEVSGLEMITYWLSHL 916
            ....:::::..|.:|.|..:.| .:.:|:::  |....:.||.:..|.:|.:||:.::.||||.|
Mouse  1051 QPSPQRKEWPGSTDGKIVAFKI-QLGMALLVSGFCILTVTERHNKTKHMQFLSGVSILVYWLSAL 1114

  Fly   917 AFDMVVFFI-----LVL------------------ALLLPLYGYA--PWYLLLCVLFFTGLAG-- 954
            .||:::|||     ||:                  .|:|.|:|::  |...||..||....:.  
Mouse  1115 VFDLIIFFISCCFLLVMFKYCKFDIYVTDYHILDTMLILTLFGWSAIPLTYLLSFLFSKSNSAYI 1179

  Fly   955 --LIFIYF--LISMLSATFLAVSMILLSVIIGSLILMILGALALIFKMVYVAIYVANMHPLIAGY 1015
              |:|.|.  .:|:|..|.:...  :.:::..|....:|.|| |:|.|.       |:...|:.|
Mouse  1180 NLLVFCYLSGTLSLLMDTIIEAR--ISTIMSNSTQTFLLNAL-LLFPMY-------NLGKCISEY 1234

  Fly  1016 NCIQKCFHYMSLCGSYISEAQNPLSENLTSDEMYCI---NPLAFLEPRCVCVNPMTWPDM----- 1072
            ..|.:                         .:|.||   |.|.:|.    |.|..|..::     
Mouse  1235 TVIYR-------------------------KKMLCIQQKNALKYLN----CSNKHTKKNIYSLKK 1270

  Fly  1073 ------LVMLGTAIILFLLIMFF----------------EYGSCVWYRCKGCCPYSSKGSIEDPK 1115
                  |:.:..|..:|||::||                .:|:|..|: .........|:.||..
Mouse  1271 PMLGKYLIAMSIAGFVFLLLIFFWENISWKVKMFIHQHIYFGACKKYK-PDIISKELSGTSEDND 1334

  Fly  1116 VSREAEKIRAMDADQIGTRALVVNGVSKKYGCDQ--LAVNNISFALKPSHCVGLLGPNGAGKTTT 1178
            |..|..:| ....::.....:::..::|.|....  |||.|||.|::...|.||||.||||||||
Mouse  1335 VENERREI-LYQPEKFLNCPVLIKELTKIYFKSPLILAVKNISLAIQERACFGLLGFNGAGKTTT 1398

  Fly  1179 FKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKD 1243
            |:::.||:....|:::|.|.|:.....|...::|||||.|:..|::||.:::.::..|||.....
Mouse  1399 FQILTGENIPTAGDVFIDGISLTKNIVKVRSKIGYCPQFDALLEYMTGWEIMIMYARIWGISEHQ 1463

  Fly  1244 LNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVA-CGANSLICLDEPSAGVDPASRRHVWT 1307
            :....:|..:......|.:..|:.||.|.||:::.|:| .|..|:|.|||||.|:||.:||.:|.
Mouse  1464 IQPYVKKYLNSLDLESHANSLISTYSEGNKRRLSTAIATMGKPSVIFLDEPSTGMDPRARRLLWD 1528

  Fly  1308 IINEVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKGMTLKLVVNVQPD 1372
            .:.::.:.|||:::|||:|:|..|||::..|:|.|.:..:||.|::|||......||..|     
Mouse  1529 TVIKIRESGKAIIITSHSMEECEALCTRLSIMVRGRLTCLGSPQYLKNKFGNIYILKAKV----- 1588

  Fly  1373 NMVAMLTKIEDDIYMTYPNAELKEKYEFSGRLTFQI-SKDTSWSEIFEYVEGNRSSWHLEDYSLS 1436
            .....|.:.::.|.:|:|.:||::  |..|.|.:.| .|:.||.::|..:|..:..::|||||:|
Mouse  1589 KSGETLDEFKNFITLTFPGSELQQ--ENQGILNYCIPRKNNSWGKVFGILEKAKEQYNLEDYSIS 1651

  Fly  1437 QPSLEDAFEEIAEERRK 1453
            |.:|:..|...|::.||
Mouse  1652 QITLDQVFLSFADQDRK 1668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 rim_protein <81..1451 CDD:130324 438/1482 (30%)
Abca15NP_796187.2 rim_protein <108..1665 CDD:130324 465/1572 (30%)

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