DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42816 and CG34120

DIOPT Version :9

Sequence 1:NP_730301.3 Gene:CG42816 / 39977 FlyBaseID:FBgn0261998 Length:1459 Species:Drosophila melanogaster
Sequence 2:NP_001285513.1 Gene:CG34120 / 318066 FlyBaseID:FBgn0083956 Length:1998 Species:Drosophila melanogaster


Alignment Length:1550 Identity:356/1550 - (22%)
Similarity:634/1550 - (40%) Gaps:341/1550 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KDLPSP----PIFKSDNSSTLQDVGIMIIVIIIFFVVVSLTKSIVEEKELQLKVTLNLMGVGSCL 107
            |..|.|    .:||. .....|.|.:..::.::.||.:|:.:.| ..:|.:..:.:..||:.:..
  Fly   611 KQFPYPAFLNDVFKR-GLYLAQGVQVAYLLGLVVFVALSVRERI-WMRESRNSMLMRSMGLKAHS 673

  Fly   108 QWVAWYIQTF----IIFLIGSSIITLFWKLVLPNSEISFMPFTHWSMALFVLLVLSHCTICFSFL 168
            :.|||.:.:|    :||.:.|.::          .....:.:|:|...:|..|....|.|.|.::
  Fly   674 ELVAWALMSFLELCVIFALISGVL----------YSGGILGYTNWFFMMFYCLSFGLCLISFCYM 728

  Fly   169 MSSLISTTYRISLVTFLALIATYLPFLILHSKGCSEGLNVFLSLFLLSGLQVLVVGICMWEDYGE 233
            .::..::....::.:.|....:..||:|           |.:....||..:..:|.:.....:.:
  Fly   729 CTNFFNSANIGAVASALLFFISLCPFII-----------VLMFDAKLSVFESFLVDLSFTTAFAK 782

  Fly   234 GLQWGNLFETSWPGGTLSVGYILLVMILASFLSLLLCLYLEKIRPGPYGVPQPWHFPCTRCCSTE 298
            |  ||.|.........|:|.:::.|....|..::.|.::|                        .
  Fly   783 G--WGELIRMELQQEGLTVRHLIQVGPARSECAMALLMFL------------------------L 821

  Fly   299 SLLPYSRLFNRIFGI-YSAAPDEERPDLQLIEPDPVDKIAGVQIRGLSKTFGKMEVVKNVSFDMF 362
            .||.|:     :.|: |......:......:....:|...|..:..:||.:|....|.|:|.|..
  Fly   822 DLLLYA-----VIGLAYQRYKKTDNYSFVKVSRSQLDGKLGASLVNVSKLYGSKCAVSNLSLDFA 881

  Fly   363 EGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGFDIRQERRQAQRCIGLCPQQNVLFKHLS 427
            ..|::.|:|.|||||:|||.:|.|.|..:||..|:.|          :..:|:|.|.|:|...|:
  Fly   882 RNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLLAG----------EHQVGVCWQDNILIPTLT 936

  Fly   428 SVSHIQLFSRLR----GLRGA-EVKSEVQNYLKKLNLQEKKRLAARNLSGGTQRRLSVACSLCGG 487
            :..|:||:::::    |..|. |::|||...|:.||..:.:...:..||||.:|||.||.:....
  Fly   937 AREHLQLYAQIKIPPGGSGGVEEIRSEVAQTLQSLNFGKHESYPSWQLSGGYRRRLCVAIAFIAS 1001

  Fly   488 VKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSL 552
            ..|:|.|||..|:|..||:::|:||...::|..::..||.:|:.:.|.|.:||:.:|::....|.
  Fly  1002 PSVVILDEPCNGVDAKARKDIWQLIERLRQGRAVIFATHFMDEAKYLSDSLVIMRNGRIIAQHSR 1066

  Fly   553 PFLKKQVDASCLITCEARKRC-DLEKLTSLISR-----------HVGTIQPFSIKGRDVCYKLPL 605
            ..|::    .|......|.|| |...:|.:|.:           |.|        ..|..:.|.:
  Fly  1067 DSLQR----LCTSNYSIRLRCADATGVTFVIQKAQQLLPQTQVTHSG--------AADYPHSLTI 1119

  Fly   606 SKSKYFSSL------FRD-LESQMNILGVRGFSL-SSVSLEEIFMSFGAEDLNSRQSGGAEKRDD 662
            :.| |...|      |.: |:||:....:....| :|.|||:.|     |.||........:|..
  Fly  1120 NAS-YAEHLTPGAVEFLELLQSQVTAGSISDVELTTSSSLEQEF-----EQLNRNGEDAGPRRPA 1178

  Fly   663 DDRDDDEENE--VQDGNVRSCKKQWRAMMTKKVMALYDNKVYFLLLLLTPIVYYITTLMMATKPH 725
            .||.......  :.|....:| ||:|.:|.|::..|..|....|.:||.|.::.:..:...    
  Fly  1179 SDRSGVVAGPAMITDEPPTAC-KQFRLLMGKRLRHLSRNYRLLLYVLLLPALFELCAMWFV---- 1238

  Fly   726 HSGRPTFNISDYGVDKFTILLSVPVSKS-------YTEERRADSIASLI----------KGKLKL 773
                 ::.:.|   |..|:|   |:|:|       :....||.|.:..:          .|:.::
  Fly  1239 -----SYRLED---DFDTVL---PLSRSLYPQTAQFLSHERATSFSEKLYPQLRTSCDHLGECRV 1292

  Fly   774 IVVSEQIKDYVDDKWKSREGRREINFVSMAIDTGDRTGLIG-----WVGPRHYVHAAPMILNLVY 833
            ...|:|..|:|.:.|.....||...:           ||.|     |...:.| |:....||.:.
  Fly  1293 FNTSQQSYDWVLNSWGEYSERRYGGY-----------GLNGSGATVWYNNKGY-HSMMAWLNDLN 1345

  Fly   834 NALAQELIG-PKISIEVTSVPFTLRKKE---DFLISNNGDIPIYVIGYVSIAMIIFSSAV--IQE 892
            :.|.:..:. .:.||...:.|:.|...|   ..::...||..:..|..::..:::.|.:|  :.|
  Fly  1346 SELLRTTMNDSESSILTLNEPWKLGFAELSTSSILRQAGDGSMVFILLIAFGLVVASGSVYLVNE 1410

  Fly   893 RVSHMKMLQEVSGLEMITYWLSHLAFDMVVFFILVLALLLPLYGYAPWYLLLCVLFF-------- 949
            ||:..|:.|.:.|:..:||||..|.:|   :.::||.|::         .|:.:|.|        
  Fly  1411 RVNGEKLQQRLCGVSAVTYWLVALVWD---YLVMVLGLIV---------CLVVILMFGMPVFVDR 1463

  Fly   950 ---TGLAGLIFIYFL-----ISMLSATFLAVSMILLSVIIGSL--------ILMILGALA----- 993
               .|:.||...:..     :.:....|...|:.::|:...:|        |::|||.:.     
  Fly  1464 QQLVGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFCANLIVPLVTMGIILILGVVGDGPAW 1528

  Fly   994 -----------LIFKMVYVAIYVANMHPLIAGYNCIQKCFHYMSLCGSY----------ISEAQN 1037
                       |||.          :|.|..|         ::.||.:|          |...::
  Fly  1529 DDWRHALNQAFLIFP----------IHALGDG---------FLELCKNYMVALVFRRYDIDSYKH 1574

  Fly  1038 PLSENLTSDEMYCINPLAFLEPRCVCVNPMTWPDMLVMLGTAIILFLLIMFFEYGSCVWYRCKGC 1102
            ||:.:|.....                      ..|:::|.|.::..:::.:.....:|.|.:..
  Fly  1575 PLASDLLGRHF----------------------TALLLVGVAALIINVLIEWHLLRRLWQRVERL 1617

  Fly  1103 --CPYSSKGSIEDPKVSREAEKIRAMDADQIGT--RALVVNGVSKK-------YGCDQLAVNNIS 1156
              |.|           .||.:|:..:....|.:  ::.|..|.:.:       |.....||.|::
  Fly  1618 LDCTY-----------RRELDKLGQLKLVNIQSIFKSCVDTGEAVRAENLWLAYRRGHYAVRNVN 1671

  Fly  1157 FALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISGYSMRMKRNKAMKELGYCPQSDSFF 1221
            |:::...|.||||.|||||:|.||::.|:...|.|.||..           ...:.|||||:...
  Fly  1672 FSVQRGECFGLLGKNGAGKSTIFKLLTGQLQPDVGQIYFE-----------QPGISYCPQSNPLD 1725

  Fly  1222 EFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAV-ACGAN 1285
            ..||..:.::.:..:.|.  :||::..:::.|.:..|.:.|.::...|||.:||:..|| .||..
  Fly  1726 PLLTTTECIRFYGRLRGI--RDLDQFLDRVLDTYELRPYKDVQVRNLSGGNRRKLTVAVTCCGCT 1788

  Fly  1286 SLICLDEPSAGVDPASRRHVWTIINEVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSV 1350
            ..:.:|||::.:||.:|..|:..|.::....:||:||||::.||..||.:..:|..|.:.|..|.
  Fly  1789 PTVLMDEPTSDMDPVTRDMVYATIEQLLLARRAVVLTSHSVSEIEHLCQRVAVLRAGQVIASDSP 1853

  Fly  1351 QHVKNKIAKGMTLKLVVNVQPDNMVAMLTKIEDDIYMTYPNAELKEKYEFSGRLTFQISKDTS-- 1413
            |.:|::  .|....:.....|... |:|::   .:....|.|...:.|..|.|...::....|  
  Fly  1854 QRLKSE--HGGYYAVTCFCGPAQQ-AILSR---SLNQRLPGARDLQHYAHSLRFLVRVRSPGSLG 1912

  Fly  1414 ----WSEIFEYVEGNRSSWHLED-------YSLSQPSLEDAFEEIAEERRKKKSN 1457
                .||:|..         |.|       :|||:...|..||.|.:......||
  Fly  1913 DAPLLSELFAI---------LCDVCVNVARFSLSRCRFETVFERILDSSESNGSN 1958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42816NP_730301.3 CcmA 336..643 CDD:224054 100/331 (30%)
ABC_subfamily_A 339..556 CDD:213230 74/221 (33%)
ABC2_membrane_3 <821..1018 CDD:289468 50/242 (21%)
CcmA 1135..1450 CDD:224054 93/335 (28%)
ABC_subfamily_A 1136..1354 CDD:213230 70/225 (31%)
CG34120NP_001285513.1 ABC2_membrane_3 <621..760 CDD:289468 30/161 (19%)
ABC_subfamily_A 859..1073 CDD:213230 75/227 (33%)
drrA 865..1162 CDD:130256 97/319 (30%)
ABC2_membrane_3 1230..1601 CDD:289468 82/450 (18%)
Mem_trans 1436..>1552 CDD:304621 24/146 (16%)
ABC_subfamily_A 1651..1857 CDD:213230 68/218 (31%)
drrA 1666..1945 CDD:130256 87/306 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 228 1.000 Inparanoid score I138
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 1 1.000 - - otm46598
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - P PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.870

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