Sequence 1: | NP_730301.3 | Gene: | CG42816 / 39977 | FlyBaseID: | FBgn0261998 | Length: | 1459 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006247716.1 | Gene: | Abca6 / 303639 | RGDID: | 1308998 | Length: | 1630 | Species: | Rattus norvegicus |
Alignment Length: | 1602 | Identity: | 402/1602 - (25%) |
---|---|---|---|
Similarity: | 704/1602 - (43%) | Gaps: | 315/1602 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 SYP--------LYKTGFLAVQQALS----QVHIKHKCKE-------FNKTQGDIKFPPIKDLP-- 50
Fly 51 SPPIFKSDNSSTLQDVGIMIIVIIIFF--VVVSLTKSIVEEKELQLKVTLNLMGVGSCLQWVAW- 112
Fly 113 --YIQTFIIFLIGSSIITLFWKLVLPNSEISFMPFTHWSMALFVLLVLSHCTICFSFLMSSLIST 175
Fly 176 TYRISLVTFL-ALIATYLPFLILHSKGCSEGLNVFLSLFLLSGLQVLVVGICMWEDYGEG----- 234
Fly 235 -LQW---GNLFETSWPGGTLSVGYILLVM--ILA--SFLSLLLCLYLEKIRPGPYGVPQPWHFPC 291
Fly 292 ---TRCCSTESLLPYSRLFNRIF--GIYSAAPDEERPDLQLIEP-DPVDKIAG---VQIRGLSKT 347
Fly 348 F----GKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALINGFDI--RQER 406
Fly 407 RQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLNLQEKKRLAARNLS 471
Fly 472 GGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKEGCTILLTTHQLDDGEVLGD 536
Fly 537 RVVIISDGQLRCIGSLPFLKKQVDASCLITCEARKRCDLEKLTSLISRHVGTIQPFSIKGRDVCY 601
Fly 602 KLPLSKSKYFSSLFRDLESQMNILGVRGFSLSSVSLEEIFMSFGAEDLNSRQSGGAEKRDDDDRD 666
Fly 667 DDEENEVQDGNVRSCKKQ------WR----AMMTKKVMALYDNKVYFLLLL------LTPIV-YY 714
Fly 715 ITTLMMATKPHHSGRPTFNISDYGVDKF------------TILLSVPVSKSYTEERRADSIASLI 767
Fly 768 KGKLKLIVVSEQIKDYVDDKWKSREGRREINFVSMAIDTGDRTGLIGWVGPRHY----------V 822
Fly 823 HAAPMILNLVYNALAQELIGPKISIEVTSVPFTLRKKEDFLISNNGDIPIYVIGY------VSIA 881
Fly 882 MIIFSSA--VIQERVSHMKMLQE----VSGLEMITYWLSHLAFDMVV--------FFILVLALLL 932
Fly 933 PLYGYAPWYLLLCVLFFTGLAGLIFIYFLISML-------SATFLAVSMILLSVIIGSLILMILG 990
Fly 991 ALALIFKMVYVAIYVANMHPLIAGYNCIQKCFHYMSLCGSYISEAQNPLSENLTSDEMYCINPLA 1055
Fly 1056 FLEPRCVCVNPMTWPDMLVMLGTAIILFLL-IMFFEYGSCV-----WYRCKGCCPYS-------S 1107
Fly 1108 KGSIEDPKVSREAEKIRAMDA------DQIGTRALVVNGVSKKYG------CD----QLAVNNIS 1156
Fly 1157 FALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIYISGYSMRMK---RNKAMKELGYCPQSD 1218
Fly 1219 SFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQFGFRKHLDKKITYYSGGTKRKINAAVACG 1283
Fly 1284 ANS-LICLDEPSAGVDPASRRHVWTIIN-EVAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYA 1346
Fly 1347 MGSVQHVKNKIAKGMTLKLVVNVQPDNMVAMLTKIEDDIYMTYPNAELKEKYEFSGRLTFQ--IS 1409
Fly 1410 KDTSWSEIFEYVEGNRSSWHLEDYSLSQPSLEDAFEEIAEER 1451 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42816 | NP_730301.3 | CcmA | 336..643 | CDD:224054 | 106/315 (34%) |
ABC_subfamily_A | 339..556 | CDD:213230 | 81/222 (36%) | ||
ABC2_membrane_3 | <821..1018 | CDD:289468 | 43/233 (18%) | ||
CcmA | 1135..1450 | CDD:224054 | 97/331 (29%) | ||
ABC_subfamily_A | 1136..1354 | CDD:213230 | 71/232 (31%) | ||
Abca6 | XP_006247716.1 | ABC2_membrane_3 | 35..420 | CDD:289468 | 72/304 (24%) |
ABC2_membrane_4 | 220..409 | CDD:289500 | 50/226 (22%) | ||
CcmA | 480..795 | CDD:224054 | 106/315 (34%) | ||
ABC_subfamily_A | 482..705 | CDD:213230 | 81/222 (36%) | ||
ABC2_membrane_3 | 859..1171 | CDD:289468 | 67/358 (19%) | ||
ABC2_membrane_4 | 1007..1178 | CDD:289500 | 33/175 (19%) | ||
CcmA | 1279..1605 | CDD:224054 | 97/332 (29%) | ||
ABC_subfamily_A | 1300..1514 | CDD:213230 | 68/213 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.720 |